| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2309 |
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| Symbol | pyrD |
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| ID | 1183960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2556168 |
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| End bp | 2557199 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393688 |
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| Product | dihydroorotate dehydrogenase |
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| Protein accession | NP_792128 |
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| Protein GI | 28869509 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACC TGGCCCGCCA GTTACTGTTC AAACTTTCCC CGGAAACCTC GCACGACCTT
TCGCTGGACC TGATCGGTGC CGGTGGACGG CTGGGCCTCA ACGGCTTGCT TGGCAAGTCT
GCGGCGAAGT TGCCGGTCAG CGTCATGGGC CTTGAGTTTC CTAACCCGGT AGGGTTGGCC
GCCGGCCTGG ACAAGAACGG CGCCGCCATC GACGGGTTTG CGCAACTGGG TTTCGGCTTT
GTCGAGATCG GCACTGTGAC ACCCCGTCCG CAGCCGGGTA ACCCCAAGCC GCGTATTTTC
CGCCTGCCCA ACGCAGAAGC CATTATCAAC CGCATGGGCT TCAACAACCT GGGTGTAGAC
AACCTGGTGT CGAGGGTCGA AGCGGCAAAG TATCGCGGCA TTCTGGGCAT CAATATCGGC
AAGAACTTCG ACACGCCGGT CGAGCGCGCG GTGGACGATT ACCTGATCTG TCTGGACAAG
GCCTATGCCC ACGCCAGCTA CGTCACCGTC AACGTCAGCT CGCCGAATAC GCCGGGGCTG
CGCAGTCTGC AGTTCGGCGA TTCGCTCAAG CAACTGCTTG AAGCTCTGAG CCTGCGCCAG
CAGGAACTTA CGCAGCGGCA CGGCAAGCGC GTGCCGCTGG CGATCAAGAT TGCCCCGGAC
ATGACCGATG AAGAAACCGT GCTGGTCGCC GCCGCCCTGA TCGAGTCGGG CATGGACGCA
GTGATCGCCA CCAACACCAC ACTGAGCCGC CAGGGTGTCG AAGGCTTGCC GCACGGTGAC
GAAGCGGGTG GTTTGTCGGG CGCGCCGGTT CGCGAGAAAA GCACGCACAT CGTCAAGGTA
CTGGCCGGCG AACTGGCAGG CCGAATGCCT ATCATTGCCG CTGGCGGTAT CACCGAAGGC
CGGCATGCAG CCGAGAAGAT AGCCGCAGGC GCCAGCCTGG TGCAGATCTA CTCGGGCTTC
ATCTATAAAG GCCCGGCGCT GATTCGCCAG TCGGTGGATG CCATCGCGGC GATGCCACGC
ACAGCGAGCT GA
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| Protein sequence | MYNLARQLLF KLSPETSHDL SLDLIGAGGR LGLNGLLGKS AAKLPVSVMG LEFPNPVGLA
AGLDKNGAAI DGFAQLGFGF VEIGTVTPRP QPGNPKPRIF RLPNAEAIIN RMGFNNLGVD
NLVSRVEAAK YRGILGINIG KNFDTPVERA VDDYLICLDK AYAHASYVTV NVSSPNTPGL
RSLQFGDSLK QLLEALSLRQ QELTQRHGKR VPLAIKIAPD MTDEETVLVA AALIESGMDA
VIATNTTLSR QGVEGLPHGD EAGGLSGAPV REKSTHIVKV LAGELAGRMP IIAAGGITEG
RHAAEKIAAG ASLVQIYSGF IYKGPALIRQ SVDAIAAMPR TAS
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