| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2300 |
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| Symbol | cobA |
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| ID | 1183951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2543960 |
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| End bp | 2544721 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393679 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | NP_792119 |
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| Protein GI | 28869500 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00412694 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGCAA AAGTATGGCT GGTAGGCGCA GGCCCGGGCG ACCCGGAATT ACTGACCCTC
AAGGCAGTTC GCGCCTTGCA CGAAGCCGAC GTGGTGTTGA TCGATGATCT GGTCAATACC
GCCGTGCTCG AGCACTGCCC GCAGGCGCGA GTGATTGCCG TCGGCAAGCG CGGAGGCTGC
CGCTCGACGC CACAGGAGTT TATCCATCGC CTGATGCTGC GCTACGTGCG CCAGGGCAAA
TGCGTGGTCC GCCTCAAAGG CGGCGACCCG TGCATCTTCG GGCGTGGCGG TGAAGAGGCA
CAGTGGTTGC AGGAGCGCGG TGTCGCGGTA GAACTGGTCA ACGGCATTAC CGCAGGCCTG
GCCGGGGCAA CTCAATGCGG GATCTCGCTG ACCCTGCGCG GTATCAGTCG CGGCGTGACG
CTGGTGACCG CCCACACTCA GGACGACAGC AGCCTCAACT GGCAAGCGCT GGCACAAGGC
GGGACGACGC TGGTGGTGTA CATGGGTGTG GCGAAACTGG CGGAAATTCG CGAAAGCCTG
CTGGCAGGCG GAATGATTGG CGACATGCCG GTGGCGATGA TTGAAAACGC TTCGCTGCCC
TGGCAGCGTG AATGCCGCAG CACACTGAAT GCGATGCAGC GTGACGCAGC CGCATTCGAG
CTGAAAAGCC CGGCGATCCT GGTGATCGGC GCGGTCGCGG CGTTCAGCAA CGAGCTGCTG
AATCAGACCC TGGTAGAGCA AGCACAGCTG CAAGCCAGCT GA
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| Protein sequence | MSAKVWLVGA GPGDPELLTL KAVRALHEAD VVLIDDLVNT AVLEHCPQAR VIAVGKRGGC
RSTPQEFIHR LMLRYVRQGK CVVRLKGGDP CIFGRGGEEA QWLQERGVAV ELVNGITAGL
AGATQCGISL TLRGISRGVT LVTAHTQDDS SLNWQALAQG GTTLVVYMGV AKLAEIRESL
LAGGMIGDMP VAMIENASLP WQRECRSTLN AMQRDAAAFE LKSPAILVIG AVAAFSNELL
NQTLVEQAQL QAS
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