| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2298 |
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| Symbol | |
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| ID | 1183949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2542234 |
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| End bp | 2542731 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637393677 |
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| Product | RNA polymerase sigma factor-70 sigW, putative |
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| Protein accession | NP_792117 |
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| Protein GI | 28869498 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000852956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGCGGG CCTATGAAGA ATTGATGCGC CGTTACCAGC GAACGCTTTT TAACGTGTGT
GCACGATATC TGGGGAACGA TCGCGATGCT GACGATGTCT GTCAGGAGGT GATGCTTAAA
GTGTTGTACG GGTTGAAAAA TTTTGAAGGT AAATCTAAAT TTAAGACCTG GCTGTACAGC
ATCACCTACA ATGAATGCAT CACGCAGTAC AGGAAGGAAC GGCGTAAGCG TCGCTTGATG
GACGCGTTGA GTCTGGATCC ACTTGAGGAA GCGTCGGAAG AAAAGACGCC CAAACCTGAA
GAGCGGGGCG GACTTGATCG CTGGCTTGTG TATGTGAACC CGATCGATCG GGAAATTCTG
GTACTGCGTT TTGTTGCAGA ACTTGAATTC CAGGAGATCG CAGACATCAT GCACATGGGC
TTGAGCGCAA CGAAAATGCG TTACAAGCGG GCTTTGGATA AATTACGTGA GAAATTTGCG
GGAATCGCCG AAACTTAA
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| Protein sequence | MTRAYEELMR RYQRTLFNVC ARYLGNDRDA DDVCQEVMLK VLYGLKNFEG KSKFKTWLYS
ITYNECITQY RKERRKRRLM DALSLDPLEE ASEEKTPKPE ERGGLDRWLV YVNPIDREIL
VLRFVAELEF QEIADIMHMG LSATKMRYKR ALDKLREKFA GIAET
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