Gene PSPTO_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2297 
Symbol 
ID1183948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2541234 
End bp2542058 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID637393676 
Producthypothetical protein 
Protein accessionNP_792116 
Protein GI28869497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000644862 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA ATCTCTGGAC CCAGAGCCTT CTTGCTGCAA TGACTGCGTT GTGGGCCAAG 
GTTGCAAACT TCATCCCCAA CCTGTTTGGT GCCCTGGTTG TGGTGCTGCT GGGTTTTGTC
GTAGCCAAGC TGCTAGACGC ACTGCTGTCC AAATTGCTGG CCAAGCTGGG CCTTGATCGT
CTGGTCGGTG GCACCGGCCT GACCAAGATC ATCGGGCGGG CTGGCGTCAA GGTGCCGATT
TCCACGTTGA TCGGCAAGAT CGTCTACTGG TTCGTATTGT TGATCTTCCT CGTTTCTGCA
GCCGAATCGC TTGGCTTGCA GCGAGTGTCA GCTACGCTGG ACATGTTGGC GCTGTATTTG
CCGAAGGTAT TTGGTGCGGC ACTGGTGTTG CTGGTCGGCG TATTGCTCGC GCAACTGGTC
AATGGGCTGG TGCGCGGCGC GGCCGAAGGG GTAGGCATCG ATTATTCCGC AGGTCTTGGG
CGAATTGCTC AGGGCCTGGT GATCATCATC AGTATTTCGG TTGCGATCAG CCAGCTTGAG
GTCAAGACTG ACCTGCTGAA CCACGTTATT GTGATTGCAT TGATTACCGT TGGTCTGACA
GTGGCGCTGG CTTTAGGCCT GGGCAGTCGT GAAATCGCCG GGCAGATCAT TGCCGGGATC
TATGTTCGCG AGCTTTTTCA GGTCGGCCAG CAGGTACAGG TAGGCGATAC AGAGGGTCAG
ATCGAGGAAA TCGGTACGGT CAAGACAACG CTGTTGACAG ACGAGGGGGA GCTGGTGTCG
TTTTCCAACC GCATTCTCCT GGAGCAGAGA GTAATCAGCC GTTAA
 
Protein sequence
MELNLWTQSL LAAMTALWAK VANFIPNLFG ALVVVLLGFV VAKLLDALLS KLLAKLGLDR 
LVGGTGLTKI IGRAGVKVPI STLIGKIVYW FVLLIFLVSA AESLGLQRVS ATLDMLALYL
PKVFGAALVL LVGVLLAQLV NGLVRGAAEG VGIDYSAGLG RIAQGLVIII SISVAISQLE
VKTDLLNHVI VIALITVGLT VALALGLGSR EIAGQIIAGI YVRELFQVGQ QVQVGDTEGQ
IEEIGTVKTT LLTDEGELVS FSNRILLEQR VISR