| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2290 |
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| Symbol | |
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| ID | 1183941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2533545 |
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| End bp | 2534735 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393669 |
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| Product | hypothetical protein |
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| Protein accession | NP_792109 |
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| Protein GI | 28869490 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.099053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCACT CACCACAGAT CCGAATCCCC GCAACCTACA TGCGCGGGGG CACCAGCAAG
GGGGTGTTTT TCAGGCTCAA TGATCTGCCG CAAGCTGCGC AAACCCCCGG TCCGGCAAGG
GATGCGCTGT TGTTGCGGGT CATCGGCAGC CCCGACCCCT ACGAAAAGCA GATTGACGGC
ATGGGCGGGG CGACGTCGAG CACCAGCAAA GCGGTGATCG TGTCGCGCAG CAGCAGGCCC
GATCACGATG TCGATTACCT GTTCGGTCAG GTGTCCATCG ACAAGCCTTT CGTGGACTGG
AGCGGAAATT GCGGCAACCT GTCGGCAGCC GTGGGCTCGT TTGCCATCGC CAGCGGCCTG
CTCGACCCCG GCCGTGTGCC GCAGAACGGC GTCGTCATCG TGCGTATCTG GCAAGCCAAT
ATCAGCAAGA CCATCATCGC TCATGTGCCC ATCAGCAATG GCGAGGTTCA GGAAACCGGC
GATTTCGAGC TGGATGGAGT GACCTTCCCG GCCGCAGAGG TGCAGCTTGA GTTTCTTGAC
CCGTCGGCGG ATGAAGAGGG CGCAGGCGGC TCGATGTTCC CCACCGGTAA TCTGCTCGAT
GACCTGCAAG TGCCCGGTGT CGGCACTTTG AAAGCGACCA TGATCAACGC GGGCATTCCG
ACCATTTTCA TCAATGCCGC TGATATCGGC TACGCCGGCA CCGAGTTGCA GAACGATATC
AACGCCGATC CGCTCGCGCT TGCCCGGCTT GAGACCATCC GCGCTTACGG TGCCGTACGC
ATGGGCCTGA TTGGAAGCGT CGATGAAGCC GCCACGCGCC AGCACACGCC CAAAGTCGCC
TTTGTTGCGG CGCCTGCTGA CTACGTTTCC TCCAGTGGCA AGCCTGTCGC CGCGCAGGAT
ATCGACCTGC TGGTGCGCGC CGTATCAATG GGCAAGCTGC ACCACGCGAT GATGGGCACC
GCCGCCGTAG CGATTGGCAC CGCCGCCGCC ATCCCGGGCA CGCTGGTCAA CCTCGCCGCC
GGTGGTCAGG CGCGCAGCGC AGTACGCTTT GGTCATCCGT CCGGTACTTT GCGGGTCGGG
GCGCAAGCCG TTCAGGACGC GGGCGGCTGG AAAGTCACCA AAGCCCTGAT GAGTCGCAGC
GCCAGAGTCT TGATGGAAGG CTGGGTGCGC GTGCCGCAGC AGGGCGACTG A
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| Protein sequence | MAHSPQIRIP ATYMRGGTSK GVFFRLNDLP QAAQTPGPAR DALLLRVIGS PDPYEKQIDG
MGGATSSTSK AVIVSRSSRP DHDVDYLFGQ VSIDKPFVDW SGNCGNLSAA VGSFAIASGL
LDPGRVPQNG VVIVRIWQAN ISKTIIAHVP ISNGEVQETG DFELDGVTFP AAEVQLEFLD
PSADEEGAGG SMFPTGNLLD DLQVPGVGTL KATMINAGIP TIFINAADIG YAGTELQNDI
NADPLALARL ETIRAYGAVR MGLIGSVDEA ATRQHTPKVA FVAAPADYVS SSGKPVAAQD
IDLLVRAVSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGQARSAVRF GHPSGTLRVG
AQAVQDAGGW KVTKALMSRS ARVLMEGWVR VPQQGD
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