| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2288 |
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| Symbol | prpC |
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| ID | 1183939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2529613 |
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| End bp | 2530740 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393667 |
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| Product | 2-methylcitrate synthase |
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| Protein accession | NP_792107 |
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| Protein GI | 28869488 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.037213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG CAAAAGTATT GAGTGGTGCC GGGCTTCGCG GGCAGGTTGC CGGGCAGACG
GCGCTGTCGA CGGTGGGCAT GGCCGGTGCC GGGTTGACCT ATCGCGGTTA TGACGTGCGC
GAACTGGCCG CCGAGGCGCA GTTTGAAGAG GTTGCCTACC TGTTGCTGTA TGGCGAGCTG
CCAACGCAAA GCCAACTGGC CGCTTACCTG GGTAAACTCA AGGGGCTGCG TGATCTGCCG
CAGGCCTTGA AAGAAGTGCT GGAGCGCATT CCGGCAGATA CCCATCCGAT GGACGTCATG
CGCACCGGGG CATCCATGCT CGGCACGCTT GAGCCGGAGC TGAGCTTTGA TCAGCAGCGC
GACGCCACCG ACCGCCTGCT GGCGGCCTTT CCGGCGATCA TGTGCTACTG GTATCGCTTC
AGCCATGACG GCCAACGCAT CGACTGCACC ACGGACGAGT CGTCCATTGG CGGGCATTTT
CTGCATTTGC TGCTGGACAA GACCCCCAGC GAATTGCACC GCAAGGTCAT GGACGTGTCG
CTGATTCTGT ACGCCGAGCA CGAGTTCAAC GCGTCTACGT TCACCGCAAG GGTTTGCGCG
TCGACCCTGT CGGACCTTTA CTCCTGCGTC ACGGCAGCCA TCGGCACCCT GCGCGGCCCG
CTGCATGGCG GCGCCAACGA GGCGGCGATG GAAATGATTC AGCGTTTCGC CTCTGCCGAT
GAGGCCACTC AAGGCACCTT GGGCATGCTG GAGCGCAAGG AAAAGATCAT GGGCTTCGGT
CATGCGATCT ATAAGGAGTC CGACCCGCGC AACGAGGTCA TCAAGGGGTG GTCGAAAAAA
CTCGCCGACG AGGCTGGCGA CAGCGTGTTG TTTCCGGTGT CCGAGGCCAT CGACAAGGTC
ATGTGGGAGC AGAAGAAGCT GTTTCCCAAT GCCGACTTCT ATCACGCCTC GGCGTACCAC
TTCATGGGTA TCCCGACCAA GCTGTTCACG CCGATTTTCG TCTGCTCGCG CCTGACCGGC
TGGGCCGCTC ACGTTTTCGA GCAGCGCGCC AATAACCGCA TCATCCGCCC GAGTGCCGAA
TACATCGGCG TCGAACAGCG CAGCTTCGTG CCCATCGAAC AGCGCTGA
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| Protein sequence | MAEAKVLSGA GLRGQVAGQT ALSTVGMAGA GLTYRGYDVR ELAAEAQFEE VAYLLLYGEL
PTQSQLAAYL GKLKGLRDLP QALKEVLERI PADTHPMDVM RTGASMLGTL EPELSFDQQR
DATDRLLAAF PAIMCYWYRF SHDGQRIDCT TDESSIGGHF LHLLLDKTPS ELHRKVMDVS
LILYAEHEFN ASTFTARVCA STLSDLYSCV TAAIGTLRGP LHGGANEAAM EMIQRFASAD
EATQGTLGML ERKEKIMGFG HAIYKESDPR NEVIKGWSKK LADEAGDSVL FPVSEAIDKV
MWEQKKLFPN ADFYHASAYH FMGIPTKLFT PIFVCSRLTG WAAHVFEQRA NNRIIRPSAE
YIGVEQRSFV PIEQR
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