Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2285 |
Symbol | |
ID | 1183936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2526778 |
End bp | 2527329 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393664 |
Product | hypothetical protein |
Protein accession | NP_792104 |
Protein GI | 28869485 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.080209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGA CTACCCTCCC CCCGCTGTTC TGCCTGCTGT TTTTGTCAGG CCTGCTTTTT TCCGCACCTG GCCTGGCCGC CAACAAGACA GTCTATGGCC TCAACGAATA CGCCAGACTC ATCGAAATCG ACGTCGAGAT CGCCGCCAAG CTCGACACCG GCGCCAAGAC TGCCTCGCTG AGCGCCCGTG ATATCAAGCA CTTCAAGCGC AATGGCGAAA GCTGGGTGCG CTTTTATCTG GCCAGCGACA GCAAGCATGT CCACCCCATC GAACGCCCGC TGAGCCGGGT CAGCAAAATC AAGCGGCGCG CCGATGATCT CGACCCGGAT GACGAAAACA AGTACTCCTC ACGCCCGGTG ATCAGCCTCG ATATCTGCAT GGGCGAAGCT TTACGCACCA TCGAAGTGAA CTTGACCGAC CGAAGTGCTT TCCAATACCC GCTTTTGATC GGCTCCGAGG CGTTGAAACG CTTTGATGCG CTGGTCGATC CAAGTCTTAA ATATGCGGCA GGGAAGCCCG GCTGCGCTTC CGTCGCTCAA AACGCAGAGT AA
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Protein sequence | MRLTTLPPLF CLLFLSGLLF SAPGLAANKT VYGLNEYARL IEIDVEIAAK LDTGAKTASL SARDIKHFKR NGESWVRFYL ASDSKHVHPI ERPLSRVSKI KRRADDLDPD DENKYSSRPV ISLDICMGEA LRTIEVNLTD RSAFQYPLLI GSEALKRFDA LVDPSLKYAA GKPGCASVAQ NAE
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