Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2279 |
Symbol | cysB |
ID | 1183930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2520059 |
End bp | 2521033 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393658 |
Product | Cys regulon transcriptional activator |
Protein accession | NP_792098 |
Protein GI | 28869479 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0003435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCC AACAACTGCG CTACATTTGG GAAGTGGCGC ACCACGACCT CAACGTTTCC GCGACGGCCC AGAGCCTTTA CACCTCCCAG CCAGGCATCA GCAAGCAGAT CCGTCTGCTC GAGGATGAGC TGGGTGTCGA GGTTTTCGCC CGCAGTGGCA AGCACCTGAC ACGTGTGACG CCTGCTGGCG AGCGCATCAT CACCACCGCG GGTGAAATTC TGCGCAAGGT CGAGAGCATC AAGCAAATTG CCCAGGAATT TTCCAACGAG AAAAAGGGCA CGCTGTCGAT CGCTACCACT CACACCCAGG CGCGCTACGC ATTGCCGCCG GTCATCAGCA ACTTCATCAA GCAATACCCG GATGTTGCGT TGCACATGCA CCAGGGTTCG CCGATGCAGA TTGCCGAAAT GGCCGCTGAC GGAACGGTTG ATTTCGCGAT CGCCACCGAA GCGCTCGAGC AGTTCAGCGA TCTGGTGATG ATGCCGTGCT ACCGCTGGAA CCGCTGTGTG GTGGTGCCTC AGGGCCATCC GCTGACCAAG GTGCCGAAGC TGACCCTGGA GTTGCTGGCG GAATACCCGA TCGTGACGTA CGTGTTCGGT TTCACCGGTC GCTCCAAGCT GGACGAAGCG TTCAGTCATC GCGGTCTGGT GCCCAAGGTC GTCTTTACTG CTGCGGATGC GGACGTGATC AAGACCTACG TCAGGCTCAA CCTGGGTGTG GGAATTGTGG CAAGAATGGC GGTGGACGAA GAGGTCGACA GCGACCTGGT GGTGCTCGAT GCCAGCGACC TGTTCGAGTC CAGCGTCACC AAGATCGCGT TCCGTCGCGG CACTTTCCTG CGTGGCTTCA TGTGCGACTT CATCGAGAAG TTCGCCCCGC ACCTTACCCG CGAAGTCATG GCCAAGGCGA TTCAGTGCCA CAACAAGCAG GAGATGGAAG AACTGTTTGC CAATGTCGAA CTGCCGGTGC ATTAG
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Protein sequence | MKLQQLRYIW EVAHHDLNVS ATAQSLYTSQ PGISKQIRLL EDELGVEVFA RSGKHLTRVT PAGERIITTA GEILRKVESI KQIAQEFSNE KKGTLSIATT HTQARYALPP VISNFIKQYP DVALHMHQGS PMQIAEMAAD GTVDFAIATE ALEQFSDLVM MPCYRWNRCV VVPQGHPLTK VPKLTLELLA EYPIVTYVFG FTGRSKLDEA FSHRGLVPKV VFTAADADVI KTYVRLNLGV GIVARMAVDE EVDSDLVVLD ASDLFESSVT KIAFRRGTFL RGFMCDFIEK FAPHLTREVM AKAIQCHNKQ EMEELFANVE LPVH
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