| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2272 |
|---|
| Symbol | oprI |
|---|
| ID | 1183923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2514998 |
|---|
| End bp | 2515249 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637393651 |
|---|
| Product | outer membrane lipoprotein OprI |
|---|
| Protein accession | NP_792091 |
|---|
| Protein GI | 28869472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000153909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG TTCTGAAATT CTCTGCTCTG GCTCTGGCCG CAGTTCTGGC TACCGGTTGC
AGCAGCGTAT CCAAAGAAAC CGAAGCTCGT CTGACAGCTA CCGAAGACGC AGCTGCTCGT
TCGCAAGCAC GTGCCGACGA AGCCTACCGC AAGGCTGACG AAGCTCTGGC TGCTGCTCAA
AAAGCTCAGC AGACTGCTGA CGAAGCCAAC GAGCGCGCTC TGCGCATGTT GGACAAGGCT
AGCCGCAAGT AA
|
|---|
| Protein sequence | MNNVLKFSAL ALAAVLATGC SSVSKETEAR LTATEDAAAR SQARADEAYR KADEALAAAQ
KAQQTADEAN ERALRMLDKA SRK
|
|---|
| |