Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2270 |
Symbol | |
ID | 1183921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2513476 |
End bp | 2514441 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393649 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | NP_792089 |
Protein GI | 28869470 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0010326 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTCGC GCATTCCAGC CGTTACCCGC TGTCTGTCGC TTGCTGCTCT GTGCACGGCG AGCTCTGTCC ATGCTCTGGA GTTTCCATTG CCGCCGCCTG GCGAGGACAT CGTTGGTCAG GTGCAGGTCA TTCAGGCCAA ATACGAAGAT ACCTTCGCTG ACCTGGGCAC TAAATACGAC CTGGGCTATC TGGAAATGAT CGCCGCCAAC CCGGGCGTGG ACCCGTGGCT GCCGGGTGCC GGCAAGGACA TCGTGCTGCC GACCCGCTTC ATTCTGCCGC CGGGCCCGCG CGAAGGGATT GTCATCAACC TCGCCGAATA CCGCATGTAT TACTACCCCA AGGGGCAGAA TGTGGTGCAC ACCTACCCGC TGGGCGTCGG TCGTGAAGGC TGGGGTTCGC CTATCGGTGT AACCAAGGTA ACGGCCAAGA CCCCGAACCC GACCTGGACA CCCCCTGCCT CGATCAAAGC CGAGCATGCT GCCGACGGCG ATCCATTGCC CAACGTCGTG CCGGCTGGCC CGGATAACCC GCTGGGTCCG TTCAAGTTTG GTCTGGGCCT GTCCGGCTAT CTGATCCACG GCTCGAACAA GAAGTTCGGC ATAGGCATGC GCACCAGCCA CGGCTGTTTC CGCATGTACA ACAACAACGT ACTGGAACTG GCCGACATGG CCCCGGTCGG CACCACGGTG CGCATCATCA GCGAGCCCTA CAAATTCGGC CTCAGCGGCG GCAAGGTCTA TCTTGAAGCG CACACGCCAG TCGACGACCT GGGCAACCCG TCCGTGGTCG ACAAACACAC CGCCGTCATC AACGCGCTGC TCAAACGTGA CGATCTGGCC AACAACCTGC GCATGAACTG GGACATGGTC CGTGACGTGG TAGCAGCCGA AGACGGCATG CCGGTGGAGA TTGCAGTGCC GGGGGTCGCC TCTGCGAGAG CGGAAGAACC GGTGATTTTT CAGTAG
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Protein sequence | MLSRIPAVTR CLSLAALCTA SSVHALEFPL PPPGEDIVGQ VQVIQAKYED TFADLGTKYD LGYLEMIAAN PGVDPWLPGA GKDIVLPTRF ILPPGPREGI VINLAEYRMY YYPKGQNVVH TYPLGVGREG WGSPIGVTKV TAKTPNPTWT PPASIKAEHA ADGDPLPNVV PAGPDNPLGP FKFGLGLSGY LIHGSNKKFG IGMRTSHGCF RMYNNNVLEL ADMAPVGTTV RIISEPYKFG LSGGKVYLEA HTPVDDLGNP SVVDKHTAVI NALLKRDDLA NNLRMNWDMV RDVVAAEDGM PVEIAVPGVA SARAEEPVIF Q
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