Gene PSPTO_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2268 
Symbol 
ID1183919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp2512424 
End bp2513029 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID637393647 
Productacyl-CoA thioesterase I 
Protein accessionNP_792087 
Protein GI28869468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00244622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCGT GGTTTTTAAG TGCTGGCCTG GGGTTGTTGC TGCTGTCACA GGGGGCGATG 
GCGGGCACAG TCTTGATCGT TGGGGATAGT ATCAGTGCGG CTTTCGGCCT GGATACCCGT 
GTGGGGTGGG TCAGCCTGCT TGAACAGCGG CTCAAGGCCG AGGGATACAC CGACAAGGTG 
GTCAATGCGT CGATCAGCGG CGACACCAGT GCCGGGGGCC AGGCGCGTCT GCCTGCGCTG 
CTTGCAGAGC ATAAGCCCGC GCTGGTCATT CTCGAATTGG GTGGCAACGA CGGGTTGCGT 
GGCCAGCAGC CAGCTCAATT GCAACAAAAC CTTTCGTCGA TGATCGACAG CTCACGCGCG 
GCCGGTGCCA GGGTGCTATT GCTCGGTATG CAGATACCGC CCAATTACGG CCCGCGTTAC 
ACCACCGCCT TCAAAGAGGT CTACAGCCAT CTGGCCGAAG AGAAAAAGGT GCCGTTCGTG 
CCGTTCTTTC TCGAAGGTGT CGGCGGGGTG CCCGGGTTGA TGCAGGCCGA TGGTCTGCAT 
CCCGCCGCAG CGGCGCAGGG CAAGTTGCTG GAAAATGTCT GGCCGAGCCT GAAACCGCTG 
CTTTGA
 
Protein sequence
MRAWFLSAGL GLLLLSQGAM AGTVLIVGDS ISAAFGLDTR VGWVSLLEQR LKAEGYTDKV 
VNASISGDTS AGGQARLPAL LAEHKPALVI LELGGNDGLR GQQPAQLQQN LSSMIDSSRA 
AGARVLLLGM QIPPNYGPRY TTAFKEVYSH LAEEKKVPFV PFFLEGVGGV PGLMQADGLH 
PAAAAQGKLL ENVWPSLKPL L