Gene PSPTO_2265 details

Gene Information

• Locus tag: PSPTO_2265
• Symbol: greB-1
• ID: 1183916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2508463
• End bp: 2508936
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637393644
• Product: transcription elongation factor GreB
• Protein accession: NP_792084
• Protein GI: 28869465
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.104512
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGTACAA AAATCATCAC CCAGGGCGGA CACGAAGCCC TGAAGAAAGA ACTCGACTAT 
CTGTGGCGAG AGCACCGGCC CGACATCACC CAGAAAGTCG CTTGGGCAGC GTCGCTGGGG 
GATCGCAGCG AAAACGCGGA TTACCAGTAC AACAAGAAGC TGCTGCGCGA GATCGACCGA 
CGTGTGCGCT ACTTGCGCAA GCGCCTGGAA GACATGCGTG TGGTCCAGTA TTCGCCGGAA 
CAGGAGGGTC GGGTATTTTT CGGTGCCTGG GTCGAGATCG AGAACGAAGC GGGCGACCTG 
AAGAAATTTC GCGTTGTTGG CTACGACGAG ATCTACGGTC GCAACGACTA CATTTCCATC 
GACTCGCCCA TGGCCCGCGC CTTGTTGAAA AAGGAAGTGG GCGACGAGGT GCTGGTCAAC 
ACGCCGGAGG GCGAGAAGCT CTGGTTTGTG AATTCGATTG TTTATGAGCG GTGA 

 

Protein sequence

MSTKIITQGG HEALKKELDY LWREHRPDIT QKVAWAASLG DRSENADYQY NKKLLREIDR 
RVRYLRKRLE DMRVVQYSPE QEGRVFFGAW VEIENEAGDL KKFRVVGYDE IYGRNDYISI 
DSPMARALLK KEVGDEVLVN TPEGEKLWFV NSIVYER