| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2250 |
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| Symbol | |
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| ID | 1183901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2492420 |
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| End bp | 2494345 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637393631 |
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| Product | transglutaminase-like domain protein |
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| Protein accession | NP_792071 |
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| Protein GI | 28869452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCCAT TTGTCCAGCA CGTGCCGATT TCCATCACCC TCCTGTGGCT GGGCTGCACA
TTCTGGCGGG TTCAGGTGTT TCGCATGCGC GCCCGGCTGC CCGGCACCTG GATCAAGTCC
GGGTTGCTGG TGGGCACCGC GGGTGGCGTG TACCTGGCCC GTGGCAGCCT GGTCGGTCTG
GATGCGGGCG CTGCGCTGCT GGTGGCGGCT TTCGTCCTGA AAATGCTGGA GATGAACAAC
CGTCGCGACG CACGAGTGCT GATCTTCCTC GGCTTTTTTT GCGTGGCGGT TGGCTATCTG
TTCGAGGACA ACCTGCTGTG GGCGCTTTTC AGTTTGTTAC CGGTCGGGGC GTTGCTGGCT
GCGTTGATCG GCCTGCAACA ATCGGATCTG GCTGGCAAAT CCGCCGATAC GCTCAAGATG
GCCTTCAAAC TGATGGCCCA GGCCGTGCCG CTGATGCTGC TGCTGTTTGT GTTTTTTCCG
CGCCTGGACC CGCTCTGGTC CTTGCCGCAA CCGAGCAACA AGGGTGTCAC GGGGCTGTCC
GACAACATGG CGCCGGGCGA CATGGCAGAA CTGAGCAAAT CCCCCGCGCT GGTATTTCGT
GCCAGTTTTG AGGGGCCGAT GCCGGCGCGC AATCAGCTTT ACTGGCGCGG CCTGACCCTT
GAGCAGTTCG ACGGACGTCG CTGGTCGCAG TCGGCACGCG CGCAGACCGT GCAGGTGCCG
CAGTGGGAAA AACGTGGCCC TGCGCTGGCC TACAGCATTG TCATGGAGGC CAGCGGTCGA
CCTTGGATGC CGAGCCTCGA CGTGGCGCAA ACCACGTTGC CCGACGTGCG CCAGATGAGC
GATTTTCGCC TGCAACGCAG ACGGCCCATC GAGCAGTCGT TGCTGTATGC CGTCAGTTCC
TGGCCGCAGA GCCTTCGCGA CCCGCAGTCC AGCGAGCAGA TTCAGCGGCA GAACCTGCAA
CTGCCCGCCA AAGGCGATGA GCAGGCTCGC CAGTGGGCCG CTGACCTGCG CCGTCGCTAT
GCCAGGCCGG ATGCGCTGGT TGAGGCCATG CTCGGCTATT TCAGCGACCA GCCGTTTCAT
TACACCCTCA AGCCTACGCC GCTGGGTAAC GACAGCATTG ACGAGTTCCT GTTTGCCAGT
CGCCGCGGCT TCTGCGCGCA CTACGCCGGG GCCATGACCT TTGTACTGCG TGCTGCAGGC
ATTCCGGCGC GGGTGGTGGC CGGGTATCAG GGCGGCGAAC TGAACCCGGA CGGGCAGTAC
CTGACGGTGC GTCAGTTCGA TGCCCACGCC TGGGTCGAAT ACTGGCAGCC GGGCGTGGGC
TGGCGGAGTG TCGACCCGAC GGCGGCCGTT GCGCCGCAAC GTATCGAACA AGGTCTGGAG
CAGGCACTGG CGGCTGACGA AGCGTTCCTG CAGGATTCGC CGCTGTCAGC GCTGCGCTAT
CGCAACGTGC CCTGGCTCAA CACCCTGCGC CTGAGCTGGG ACAACCTCAA CTACGGTTGG
CAGCGCTGGG TACTGGGCTA TCAGGGACAA CAACAGTTAC AAATTCTCGG CCGCTGGTTT
TCCGGGTTTC AGGCACCGGT TTTTGTAGCG GGCATCGTGC TTTCACTGGG TTTGATTGCA
TTGTGGCTGT TCAAGCCATG GCAGCGCGAG AGCGATTCGC AGCTGCGCGT GTTCGGCGCA
TTTGAACGCT TGCTGGCCCG CCATGGTCTG CGTCGTATGC CGGGTGAGGG CGCTGATGCG
TTCTGCCGTC GTGCGGTGTT GTTCTTTCCG CAGCATGCCG AGGCTATCAC CGCGTTCATT
CGCGAGTTTC AGGCGCAGCG CTACGCTGGA CGACTGGCCT CGGCGAGTCG CCTGAGAGAG
GCGTTGAGGG CGCTGCGTCG GCGTTTGCCG TGGAGAGTGT CAGCCGTCAG GGACAGGCAT
TCATGA
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| Protein sequence | MLPFVQHVPI SITLLWLGCT FWRVQVFRMR ARLPGTWIKS GLLVGTAGGV YLARGSLVGL
DAGAALLVAA FVLKMLEMNN RRDARVLIFL GFFCVAVGYL FEDNLLWALF SLLPVGALLA
ALIGLQQSDL AGKSADTLKM AFKLMAQAVP LMLLLFVFFP RLDPLWSLPQ PSNKGVTGLS
DNMAPGDMAE LSKSPALVFR ASFEGPMPAR NQLYWRGLTL EQFDGRRWSQ SARAQTVQVP
QWEKRGPALA YSIVMEASGR PWMPSLDVAQ TTLPDVRQMS DFRLQRRRPI EQSLLYAVSS
WPQSLRDPQS SEQIQRQNLQ LPAKGDEQAR QWAADLRRRY ARPDALVEAM LGYFSDQPFH
YTLKPTPLGN DSIDEFLFAS RRGFCAHYAG AMTFVLRAAG IPARVVAGYQ GGELNPDGQY
LTVRQFDAHA WVEYWQPGVG WRSVDPTAAV APQRIEQGLE QALAADEAFL QDSPLSALRY
RNVPWLNTLR LSWDNLNYGW QRWVLGYQGQ QQLQILGRWF SGFQAPVFVA GIVLSLGLIA
LWLFKPWQRE SDSQLRVFGA FERLLARHGL RRMPGEGADA FCRRAVLFFP QHAEAITAFI
REFQAQRYAG RLASASRLRE ALRALRRRLP WRVSAVRDRH S
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