| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2240 |
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| Symbol | |
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| ID | 1183891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2481297 |
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| End bp | 2481560 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393621 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | NP_792061 |
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| Protein GI | 28869442 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0186177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTCGCG ACAAGGGCAA ACCACCCGGC ACTCCACCGC CCTCTCAGGA AACGCCCCCC
GATGTCCAGT TGACGGTCAA GGAACGACAA GTCCTGGAGT GGGTGGCGAT CGGCAAATCG
GCGTGGGAGA TATCACGGAT ACAAGGCTGT TCGGAAGCGA CCGTGCACTT TCATACCAGC
AATATTCGCC GCAAGTTCGG GGTGACGTCG TTGAAGGCGG CGCTGGTGAT GGCGATCAGG
CAGGGGGTTA TTTTGGTGGA GTGA
|
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| Protein sequence | MLRDKGKPPG TPPPSQETPP DVQLTVKERQ VLEWVAIGKS AWEISRIQGC SEATVHFHTS
NIRRKFGVTS LKAALVMAIR QGVILVE
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