Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2233 |
Symbol | |
ID | 1183884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2466929 |
End bp | 2468260 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637393614 |
Product | hypothetical protein |
Protein accession | NP_792054 |
Protein GI | 28869435 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.682692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATA ACACACTGGA AAGTATCACT GCCTGGATGA AAGACCCTCT CACTGATGTG ATGTTGGGCT GGGACTCAAT CGCGGTGATG GCTCGGGACG AAGTCAATTA CCTGCTGCTT GAGGAGTACA TTTCCCGCTT CTCATCCAAC ACGTATCTGA GTCCGATAAG TGGTGAGGTA CCACAGGTCG GTGGCAGGTC GAAGGAAAGC ATCCATGATT TTATTCTGGA CGCCCCCCGT CTCTCGTTCT CCGACAACGA CTTGAGCAAA TCCCATGCGT CATTGACCTG CGCCATTCTG AGCGGAACCC AAGTGACGAT GACCAACAAT GTCGACACCT GGGAGGCGGT CAGGGTCATT CGTGTCGATC CACTGCAGGG GCCGAGGCTG ACGCTCGACC TGAGCCTGGA CAGGGTCCCG GGGATTGTCG ATCTGGATGG CCGGGTCAAG CTGGACCTCA AGGAAAGTGA CAACTTCATC CTGACGTTCG CCGAGACGAT CGACGACCGG AAACTGGGCG GGGATTTTTT CAAGGACTGG TTCAACACAC TCCCGGACAA CAAGCGTGTG TGGACGCTGG GGTTCATTAG CGCGGGCAAC GTTGCACAGG TGCGCCCCGA GTCGTTCAAG ATGCGTACCC AGACCAATCC TGCGGGCTCG CTGGACCCAA CTGCGCCTGA CTATGGCGAC GGCGCTGTTC TTGTGTTCAT TCGCATGCAA GGCAATGACG AGGGCGGCGA CATCCCGGCG CAATACCGAT ACCTGATACC GGATGACCCG GGCAAGGGGT ATTCCGCCAC TGTGTTGTTC GATTCAACAC GTCTGGCCAG CATTGTGCTT CCCATTAAGC CAGTTACACA AGCGTTGCGT GCTTTGTTCG ATTCCCTCGT CCTCAGGGAA GAGTTCGATG GCACCGGCAA CATGATCAAG GCGCAAGGTA TCAGCGGTCA GTTGGTAATC CCAAGTGTCA GTGAAGAGCA TACTTTCTAC AGCGGCGGTG AAAAGATCAT TGCCTCTGTT CTCCATACCG GGTTCTGGTT TGACGTAGAG AGTGTCAAAC CTGGATGGAA TATCGGGACT ATCGAGCCTC TCCTGATAGA ACTGACTGAC CATGGCAGCG CTGCGTTTAG CTGGACAGTA AAATGGATGG ACGGCTTATA TCTCACGTTG CCGGGTGATA ACAATAATGT TCTGGTTATT TTTCGGAATG CGATAACAGA GCTGAAATGC ACCTACCGTT TTGCGGAAGA TGATGAAGAG GGCTTCGTTC TGACGCCTTC TCTGGACATC ACGTCGAGTG CGGTGAACCT GAATACGCTA GGGAAGGTCT GA
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Protein sequence | MANNTLESIT AWMKDPLTDV MLGWDSIAVM ARDEVNYLLL EEYISRFSSN TYLSPISGEV PQVGGRSKES IHDFILDAPR LSFSDNDLSK SHASLTCAIL SGTQVTMTNN VDTWEAVRVI RVDPLQGPRL TLDLSLDRVP GIVDLDGRVK LDLKESDNFI LTFAETIDDR KLGGDFFKDW FNTLPDNKRV WTLGFISAGN VAQVRPESFK MRTQTNPAGS LDPTAPDYGD GAVLVFIRMQ GNDEGGDIPA QYRYLIPDDP GKGYSATVLF DSTRLASIVL PIKPVTQALR ALFDSLVLRE EFDGTGNMIK AQGISGQLVI PSVSEEHTFY SGGEKIIASV LHTGFWFDVE SVKPGWNIGT IEPLLIELTD HGSAAFSWTV KWMDGLYLTL PGDNNNVLVI FRNAITELKC TYRFAEDDEE GFVLTPSLDI TSSAVNLNTL GKV
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