Gene PSPTO_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2233 
Symbol 
ID1183884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2466929 
End bp2468260 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content54% 
IMG OID637393614 
Producthypothetical protein 
Protein accessionNP_792054 
Protein GI28869435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.682692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA ACACACTGGA AAGTATCACT GCCTGGATGA AAGACCCTCT CACTGATGTG 
ATGTTGGGCT GGGACTCAAT CGCGGTGATG GCTCGGGACG AAGTCAATTA CCTGCTGCTT
GAGGAGTACA TTTCCCGCTT CTCATCCAAC ACGTATCTGA GTCCGATAAG TGGTGAGGTA
CCACAGGTCG GTGGCAGGTC GAAGGAAAGC ATCCATGATT TTATTCTGGA CGCCCCCCGT
CTCTCGTTCT CCGACAACGA CTTGAGCAAA TCCCATGCGT CATTGACCTG CGCCATTCTG
AGCGGAACCC AAGTGACGAT GACCAACAAT GTCGACACCT GGGAGGCGGT CAGGGTCATT
CGTGTCGATC CACTGCAGGG GCCGAGGCTG ACGCTCGACC TGAGCCTGGA CAGGGTCCCG
GGGATTGTCG ATCTGGATGG CCGGGTCAAG CTGGACCTCA AGGAAAGTGA CAACTTCATC
CTGACGTTCG CCGAGACGAT CGACGACCGG AAACTGGGCG GGGATTTTTT CAAGGACTGG
TTCAACACAC TCCCGGACAA CAAGCGTGTG TGGACGCTGG GGTTCATTAG CGCGGGCAAC
GTTGCACAGG TGCGCCCCGA GTCGTTCAAG ATGCGTACCC AGACCAATCC TGCGGGCTCG
CTGGACCCAA CTGCGCCTGA CTATGGCGAC GGCGCTGTTC TTGTGTTCAT TCGCATGCAA
GGCAATGACG AGGGCGGCGA CATCCCGGCG CAATACCGAT ACCTGATACC GGATGACCCG
GGCAAGGGGT ATTCCGCCAC TGTGTTGTTC GATTCAACAC GTCTGGCCAG CATTGTGCTT
CCCATTAAGC CAGTTACACA AGCGTTGCGT GCTTTGTTCG ATTCCCTCGT CCTCAGGGAA
GAGTTCGATG GCACCGGCAA CATGATCAAG GCGCAAGGTA TCAGCGGTCA GTTGGTAATC
CCAAGTGTCA GTGAAGAGCA TACTTTCTAC AGCGGCGGTG AAAAGATCAT TGCCTCTGTT
CTCCATACCG GGTTCTGGTT TGACGTAGAG AGTGTCAAAC CTGGATGGAA TATCGGGACT
ATCGAGCCTC TCCTGATAGA ACTGACTGAC CATGGCAGCG CTGCGTTTAG CTGGACAGTA
AAATGGATGG ACGGCTTATA TCTCACGTTG CCGGGTGATA ACAATAATGT TCTGGTTATT
TTTCGGAATG CGATAACAGA GCTGAAATGC ACCTACCGTT TTGCGGAAGA TGATGAAGAG
GGCTTCGTTC TGACGCCTTC TCTGGACATC ACGTCGAGTG CGGTGAACCT GAATACGCTA
GGGAAGGTCT GA
 
Protein sequence
MANNTLESIT AWMKDPLTDV MLGWDSIAVM ARDEVNYLLL EEYISRFSSN TYLSPISGEV 
PQVGGRSKES IHDFILDAPR LSFSDNDLSK SHASLTCAIL SGTQVTMTNN VDTWEAVRVI
RVDPLQGPRL TLDLSLDRVP GIVDLDGRVK LDLKESDNFI LTFAETIDDR KLGGDFFKDW
FNTLPDNKRV WTLGFISAGN VAQVRPESFK MRTQTNPAGS LDPTAPDYGD GAVLVFIRMQ
GNDEGGDIPA QYRYLIPDDP GKGYSATVLF DSTRLASIVL PIKPVTQALR ALFDSLVLRE
EFDGTGNMIK AQGISGQLVI PSVSEEHTFY SGGEKIIASV LHTGFWFDVE SVKPGWNIGT
IEPLLIELTD HGSAAFSWTV KWMDGLYLTL PGDNNNVLVI FRNAITELKC TYRFAEDDEE
GFVLTPSLDI TSSAVNLNTL GKV