| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2222 |
|---|
| Symbol | |
|---|
| ID | 1183873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2445595 |
|---|
| End bp | 2446629 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637393603 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_792043 |
|---|
| Protein GI | 28869424 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.464629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTCGCA GGTTCGACAC CCTGTTTGCG CGGCTGTTTG GCGGTGCACT GCTGGCTATT
CTGCTTGCGC ACTTGCTGGC CTTCATCTGG TTCACGCAAT ACGGCATGCG CCCCATGCCG
CCGCCAAGGC CTGACTTCGA GCCTGCGCAC GGCCAATTTG ATGACAGGCC GATGCACAGG
CCGCCGATCC TGGGGGGGCC GGCGATAGTG CTGTTCTTTC AGTTCATCAC TATGATCATC
GCCGCGTGGT ATGGCGCCAA GGCACTCAGC CGTCCGATAC AGCGACTCAG TGACGCCGCC
GAGCGCCTGA GTGAGGACCT CGACAGCCCG CCATTGGAAA TCAGCGGCCC CAGGGAGGCG
CGTCAGGCCG CGCAGACGTT CAACCTGATG CAAAGCAAAG TGCGCGACCA GATGCAGCAA
CGTGGACGCA TGCTGGCGGC GGTGTCCCAT GACCTACGCA CGCCGCTGTC GCGGCTTAAA
CTGCGCGTTG AACAGATCGA GGAACCCAGA CTGCACGGCC AGATGACACA GGACCTCAAC
GACATGATCA GCATGCTCGA TGCCACGCTC GCCTACCTCA ACGAGCATCG GCGCACCGAG
GGCTTGCAGC AGTTTGACCT GCAGGCGCTG ATCGAGTCCC AGGCCGAAAA TGCCCAGGAC
AATGGCGACG ACGTGCAGTA CGAGGGGCAG TGCAAACCGC TCAGGACGCA ACCGATGGCG
CTGCGCTCGT GCCTGCAGAA TCTGGTCGAC AATGCGCTGC GCTACGCCGG TAGCGCGCGC
ATCGTGATTG AAGACAGCGC AGATCACGTG CGCGTGTCGG TGGTTGATCA CGGACCGGGC
ATTGCGCCGG AGTTTCACGA GACGGTGTTT GAACCGTTCT ACCGCCTGGA AAGCTCGCGC
AATCGCAACT CCGGCGGCAT CGGCATGGGC ATGAGCATCG CCCGCGAGGC TGCGCGCCGC
ATCGGCGGGC AGTTGTCGCT GGCGCAGACC CCGGGCGGTG GTCTGACGGC GGTACTGGAC
CTGCCGCGCC TTTGA
|
|---|
| Protein sequence | MIRRFDTLFA RLFGGALLAI LLAHLLAFIW FTQYGMRPMP PPRPDFEPAH GQFDDRPMHR
PPILGGPAIV LFFQFITMII AAWYGAKALS RPIQRLSDAA ERLSEDLDSP PLEISGPREA
RQAAQTFNLM QSKVRDQMQQ RGRMLAAVSH DLRTPLSRLK LRVEQIEEPR LHGQMTQDLN
DMISMLDATL AYLNEHRRTE GLQQFDLQAL IESQAENAQD NGDDVQYEGQ CKPLRTQPMA
LRSCLQNLVD NALRYAGSAR IVIEDSADHV RVSVVDHGPG IAPEFHETVF EPFYRLESSR
NRNSGGIGMG MSIAREAARR IGGQLSLAQT PGGGLTAVLD LPRL
|
|---|
| |