Gene PSPTO_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2218 
Symbol 
ID1183869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2442420 
End bp2443274 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID637393599 
Producthydrolase, alpha/beta fold family 
Protein accessionNP_792039 
Protein GI28869420 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.364835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTGG CTGTCGAGGA AGTGCGCTTG AACCTTGGGC ATATAGAGCT GGCGGCCCAT 
CTGTTCGGCC CTGAAGACGG CCAGCCGGTC ATCGCGCTGC ACGGCTGGCT CGACAACGCC
AACAGTTTTG CCCGGCTGGC CCCGCACCTT GACGGTTTGC GGATCGTCGC GCTGGATCTG
GCCGGGCATG GCCACTCCGA TCATCGCCCG GCGGGTGCTG CCTATGCCTT GGCCGACTAT
GTGTTTGACG TCCTGCAGGT CGCCGAACAA CTGGGCTGGC AGCGCTTTGC CTTGTTAGGG
CACTCGCTGG GCGCGATCAT TGCGGTGTTG CTCGCAAGTT CGCTGCCCGA GCGGGTTACG
CGCTTGGCTC TGATTGACGG GCTTGTGCCG CTGACCGGTG ACCCCCAGTC TGCCGCCGAG
CGTATGGGCG CAGCCTTGCA GGCGCAACTG GCGCTGTCGA ACAAGAAAAA ACCGGTCTAT
CGGGATCAGG AGCGCGCCGT TCAGGCGCGC ATGAAAGGCA TGCTGGCGGT CAGTCGTGGG
GCGGCCGAAC TGCTCGCTCA ACGGGGTTTG ATGCCGGTGC CGGGCGGTTA TACCTGGCGC
AGCGACAGCC GCCTGACTTT GCCCTCAGCG ATACGGTTTA CCGAGCGCCA GGCGATGGCG
TTCGTTCACG GCATTCGCTG TCCGACACAA TTGGTGATTG CGTCGGACGG CATGCTGGCG
AAAAAACACG AGCTGCTGTC CGGCCTGCCG TTTGACGTTG CACGGCTGCC CGGCGGGCAT
CATTTGCACC TGGACGACGA GGAGGGAGCG CGCTCTGTTG CACACTGTAT CAATCGCTTT
TTCGCTGCTT CTTGA
 
Protein sequence
MRLAVEEVRL NLGHIELAAH LFGPEDGQPV IALHGWLDNA NSFARLAPHL DGLRIVALDL 
AGHGHSDHRP AGAAYALADY VFDVLQVAEQ LGWQRFALLG HSLGAIIAVL LASSLPERVT
RLALIDGLVP LTGDPQSAAE RMGAALQAQL ALSNKKKPVY RDQERAVQAR MKGMLAVSRG
AAELLAQRGL MPVPGGYTWR SDSRLTLPSA IRFTERQAMA FVHGIRCPTQ LVIASDGMLA
KKHELLSGLP FDVARLPGGH HLHLDDEEGA RSVAHCINRF FAAS