| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2212 |
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| Symbol | |
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| ID | 1183863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2436876 |
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| End bp | 2438801 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393593 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_792033 |
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| Protein GI | 28869414 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.378364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCC GTCAATGGGA TATCAATACC CGCACCCAGA TCATCAGCCT CGGCCCTGCC
CTGTTGCTGA CCGTTATGCT GATCAGCTTC TTTACGTTCG TGCGGATTCA GGACCTGCGT
CAGGAGCTCA ATCACACCGG GCAGCTCATC GCCAATCAAC TCGCCCCGGC GGTCGAACCC
GGCGTGACGG CAGGCGACAT CGACGGGCTC AAGTCGCTCA TGCGCGCAAC CCTGTCCATG
CCCAGCGTGC GTTATGTAGA AATACAGGAC GCCTCCAACA CCGTCATGGT CTACATCGAC
CAGACCCGCG AAAACGAGCA TCAGCCCAGG CAGATGGAAA TCTTCCAGGC GCCCATCCGT
CACCAGCGCG CAGCGGCGCA CACCGCTCCC GCAGCACGCA GGGAAACGCA GGACGCCGCG
TCGCCCGACT ATCTGGGTCG CGTACTGGTG GGCATGTCCA GCGAGGCGTT CAATCGACGC
CAGCAGGAGA TACTGCTCAA GGCAGGGATT CTGGCGTTGT GCGCCCTGCT GTTCACCTTT
CTGCTGGCCC GACGCCTGTC ATTGAGCCTG TCCAGACCTA TCAGCGAGAT GGGTGAAGCC
CTCAAGGCCA TTCAGCAGGG CGACTACCAC ACACCCATGC CGGTCAGCGA CGATGCCGAG
CTGGGAGCGC TGGCTCGGCA TATCAATAGC CTGGCGGAGA ACCTGCACCG CACCAGCCTT
GAACAGCAGC GCTCGGTGGC GCAACTGATC CAGACCCGCG AAGAAGCCGA ACGGGCCAAC
CGCGCCAAGT CGGATTTTCT GGCGATGATG AGTCATGAGC TGCGCACCCC CATGAACGGC
GTTCTGGGCA TGCTGCAACT CATGGAAACC ACGCGCATGA CCGATGAGCA GAGCGAGTAC
GCGACGCTGG CCACCGAGTC CACCGAACAT CTGTTGAAGG TCATCAACGA CATCCTCGAT
TTTTCCCGCA TCGAGCGCGA CGCTTTGCAA ATGGAAGGCA TCGCGTTCAA CCTCGCCGAA
CTGGTCAGCG TCTCGACCCA TGCGTTCAAC CACAGTGCAC TGCAGCGCAA GCTGTTGCTG
GAACTGCACG TCCAGCCGGG CCTGGAGGCA ATGACGGTGA TCGGCGACCC GACCCGCATC
CGTCAGATCC TGGTGAACCT GATCGGCAAC GCGCTGAAAT TCACTGAGGA AGGCAAGGTC
TGCGTCGAAG CCGACTGGTT GATGCTTGAC GATGAACAGC TGCGTTTTAC CTGCAAGGTG
CATGACAGCG GCATTGGCAT CGATGCCGAG CGACTGGAGT CCATGTTCGA TGCCTTCAAG
CAGGCAGACA GTTCGATTTC CAGACGCTAT GGCGGCACCG GGCTGGGGTT GCCGATTGCC
CGTAAGCTGG CGGAACGCAT GGGCGGCACG CTTTACGCAG AAAGCGTGGA AGGTGCGGGA
TCGGCGTTCA CCCTGCAGAT CGCTCTGCCG GTTTCGCGCT ATGTTTCGGT CGATGTCGTC
CCGCCGCCAT CTGCACTCTA TGCGTATGGC AAGGAGCGCA GCATATTGCT GGTCGAGGAC
AACCCGGTAA ACCGCACCGT GGTGCAGGCC ATGTTGCATA ATCTGGGCTG CAAAGTGGAT
GTCGCGGTCG ATGGTGTCGA CGCCGTCATG AAAGCCGGTG CAGGAAACTA CGCGCTGATC
CTGATGGATT GCCGACTGCC GGTCATGGAC GGTTATGAGG CCACTCGCAA AATCAGGCAA
CTTTCCGGAC TGGAAAGGAT CCCAATCATC GCCTTGACTG CCAACGCGCT GCATGGGGAT
CGGGACGCCT GTTTACAGGC AGGGATGGAT GATTATCTGC CGAAGCCGTT CAAACATGCT
GATTTGCAGC AGGTTTTGCA GCGCTGGTTA TCCTTTCAAG CACCTGCGAC TGGCGATAAA
TGTTAA
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| Protein sequence | MKFRQWDINT RTQIISLGPA LLLTVMLISF FTFVRIQDLR QELNHTGQLI ANQLAPAVEP
GVTAGDIDGL KSLMRATLSM PSVRYVEIQD ASNTVMVYID QTRENEHQPR QMEIFQAPIR
HQRAAAHTAP AARRETQDAA SPDYLGRVLV GMSSEAFNRR QQEILLKAGI LALCALLFTF
LLARRLSLSL SRPISEMGEA LKAIQQGDYH TPMPVSDDAE LGALARHINS LAENLHRTSL
EQQRSVAQLI QTREEAERAN RAKSDFLAMM SHELRTPMNG VLGMLQLMET TRMTDEQSEY
ATLATESTEH LLKVINDILD FSRIERDALQ MEGIAFNLAE LVSVSTHAFN HSALQRKLLL
ELHVQPGLEA MTVIGDPTRI RQILVNLIGN ALKFTEEGKV CVEADWLMLD DEQLRFTCKV
HDSGIGIDAE RLESMFDAFK QADSSISRRY GGTGLGLPIA RKLAERMGGT LYAESVEGAG
SAFTLQIALP VSRYVSVDVV PPPSALYAYG KERSILLVED NPVNRTVVQA MLHNLGCKVD
VAVDGVDAVM KAGAGNYALI LMDCRLPVMD GYEATRKIRQ LSGLERIPII ALTANALHGD
RDACLQAGMD DYLPKPFKHA DLQQVLQRWL SFQAPATGDK C
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