Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2211 |
Symbol | fabA |
ID | 1183862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2436140 |
End bp | 2436655 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393592 |
Product | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA |
Protein accession | NP_792032 |
Protein GI | 28869413 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.274835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAAAC AACACGCCTT TACCCGGGAA GACCTGCTGC GCTGCAGTCG CGGCGAGCTG TTCGGCCCAG GTAATGCGCA ACTGCCCGCC CCCAACATGC TGATGGTTGA TCGCATCACC CACATCAGCG AAGAAGGCGG CAAGTTCGGC AAAGGTGAAT TGGTCGCCGA ACTGGATATC AACCCGGACC TGTGGTTCTT TGCCTGCCAC TTCGAAGGCG ACCCGGTCAT GCCCGGCTGC CTGGGCCTGG ATGCCATGTG GCAACTGGTC GGTTTCTACC TCGGCTGGCA GGGTAATCCT GGCCGTGGCC GCGCCCTGGG TTCGGGCGAA GTGAAGTTTT TCGGTCAGGT GCTGCCTACT GCCAAAAAAG TCACCTATAA CATTCAAATC AAACGCACCA TGCGCGGCAA ACTGGTCCTG GCAATCGCCG AAGGCACCGT GAGCGTCGAT GGTCGCGAAA TCTACAGCGC CGAAGGCCTT CGCGTCGGTC TGTTTACTTC CACTGAAAAT TTCTAA
|
Protein sequence | MTKQHAFTRE DLLRCSRGEL FGPGNAQLPA PNMLMVDRIT HISEEGGKFG KGELVAELDI NPDLWFFACH FEGDPVMPGC LGLDAMWQLV GFYLGWQGNP GRGRALGSGE VKFFGQVLPT AKKVTYNIQI KRTMRGKLVL AIAEGTVSVD GREIYSAEGL RVGLFTSTEN F
|
| |