| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2200 |
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| Symbol | sucB |
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| ID | 1183851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2422347 |
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| End bp | 2423567 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393581 |
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| Product | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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| Protein accession | NP_792021 |
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| Protein GI | 28869402 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0711687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCG ATATCAAAGC CCCCTCTTTC CCGGAATCCG TTGCCGATGG CACCATTTCC
AAGTGGTACA AAAAAGAGGG TGATGCGGTA AAGCGCGACG AGATGCTGGT TGACATCGAG
ACTGACAAGG TTGTCCTGGA AGTACTGGCC GAAGCTGATG GCGTGATGGG CGCGATCACC
AAGGAAGAGG GCGCTATCGT CCTGTCCAAT GAAGTGCTTG GCACGTTGAA TGACGGTGCC
ACGGCATCTG CTGCTCCAGC ACCCGCTGCT GCGCCTGCTT CGGCACCTGC CGCTGCACCG
GCTGCCGCTG GCGAAGAAGA CCCGATTGCC GCGCCTGCTG CGCGTCAACT GGCTGAAGAG
AACGGCATCA ACCTGGCCAG CGTCAAGGGC ACCGGTAAAG ACGGCCGTAT CACCAAGGAA
GACATCGTTG CTGCCGTTGA AGCGAAGAAA TCCGCTCCAG CCGCTGCGCC TGCTGCCAAG
CCTGTCGCCG CTGCTGCTCC GGTCGTTGCC GCTGGCGACC GCACCGAGAA GCGCGTGCCG
ATGACCCGCG TTCGTGCAAC CGTTGCCAAG CGTCTGGTCG AAGCCCAGTC GAACATGGCG
ATGCTGACCA CGTTCAACGA AGTCGACATG ACCGAAGTCA TGGCGCTGCG TTCGAAGTAC
AAGGACCTGT TCGAGAAGTC GCACAATGGC GTACGTCTGG GCTTCATGTC CTTCTTCGTA
AAAGCGGCCA CCGAAGCGCT GAAACGCTTC CCGGCAGTCA ACGCTTCGAT CGACGGTTCT
GACATCGTTT ACCATGGTTA TGCCGACGTC GGTGTAGCGG TTTCCAGCGA TCGCGGCCTG
GTTGTGCCGG TTCTGCGTAA CGCCGAGCAC ATGAGCCTGG CTGAAATCGA AGGCGGCATC
GCCACCTTCG GCAAAAAAGC CCGTGACGGT AAGCTGTCCA TCGATGAGAT GACCGGTGGC
ACCTTCACGA TCACCAACGG TGGTACTTTC GGTTCGATGA TGTCGACGCC GATCGTCAAC
CCGCCACAGG CTGCAATTTT GGGAATGCAC AACATTCTGC AACGCCCGAT GGCAGTCAAC
GGTCAGGTTG TGATTCGCCC GATGATGTAT CTGGCGCTGT CTTACGATCA CCGTTTGATC
GATGGTAAAG AAGCAGTAAC TTTCCTCGTT ACCATCAAGA ACCTGCTGGA AGATCCAGCT
CGTCTGTTGC TGGATATCTG A
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| Protein sequence | MAIDIKAPSF PESVADGTIS KWYKKEGDAV KRDEMLVDIE TDKVVLEVLA EADGVMGAIT
KEEGAIVLSN EVLGTLNDGA TASAAPAPAA APASAPAAAP AAAGEEDPIA APAARQLAEE
NGINLASVKG TGKDGRITKE DIVAAVEAKK SAPAAAPAAK PVAAAAPVVA AGDRTEKRVP
MTRVRATVAK RLVEAQSNMA MLTTFNEVDM TEVMALRSKY KDLFEKSHNG VRLGFMSFFV
KAATEALKRF PAVNASIDGS DIVYHGYADV GVAVSSDRGL VVPVLRNAEH MSLAEIEGGI
ATFGKKARDG KLSIDEMTGG TFTITNGGTF GSMMSTPIVN PPQAAILGMH NILQRPMAVN
GQVVIRPMMY LALSYDHRLI DGKEAVTFLV TIKNLLEDPA RLLLDI
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