| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2199 |
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| Symbol | sucA |
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| ID | 1183850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2419474 |
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| End bp | 2422305 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393580 |
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| Product | 2-oxoglutarate dehydrogenase, E1 component |
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| Protein accession | NP_792020 |
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| Protein GI | 28869401 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.374775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAA GCGTGATGCA GCGCATGTGG AACAGTGCCC ACCTATCCGG TGGTAACGCT
GCCTATGTGG AAGAGCTCTA TGAGCTCTAC CTGCACGACC CTAACGCTGT GCCAGAAGAA
TGGCGCACCT ACTTTCAGAA GTTGCCAGCA GACGGCAGCT CTGCCACTGA TGTATCGCAT
TCGACTATTC GCGATCATTT CGTGTTGCTG GCTAAAAACC AGCGCCGCGC TCAACCGGTG
TCCGCCGGCA GTGTGAGCAG CGAGCACGAA AAGAAGCAGG TTGAAGTGCT GCGACTGATC
CAGGCGTATC GGATGCGTGG CCATCAGGCT GCTCAGCTCG ATCCGCTGGG CCTTTGGCAG
CGTCCTGCAC CCGCAGATCT GTCGATCAAT CACTACGGCT TGACCAATGC CGATCTGGAC
ACGACTTTCC GCGCTGGCGA CTTGTTCATC GGCAAAGAGG AAGCGAGCCT ACGCGAAATT
CACGAAGCGT TGCAGCAGAC ATATTGTCGC ACCATAGGCT CCGAGTTCAC CCACATCGTG
GATTCCGAGC AGCGCAACTG GTTCATGCAG CGTCTCGAAA GTGTTCGTGG TCGTCCGGCG
TTTTCGGCTG ACATCCAGAG CCACTTGCTT GAGCGTGTCA CTGCGGCGGA AGGTCTCGAG
AAATACCTGG GCACCAAATA CCCAGGCACC AAGCGTTTCG GTCTGGAAGG CGGCGAAAGT
CTGATTCCGA TGCTCGACGA GCTGATTCAG CGTTCCGGGT CCTATGGCAC CAAGGAAGTC
GTGATCGGCA TGGCCCACCG TGGTCGTCTG AACGTACTGG TCAACACCTT CGGCAAGAAC
CCGCGCGACC TGTTCGACGA GTTCGAAGGC AAGAAAAAAG TGGAACTGGG TTCCGGTGAC
GTCAAATACC ACCAGGGCTT CTCTTCCAAC GTCATGACCG CAGGCGGTGA AGTTCACCTG
GCCATGGCAT TCAACCCGTC TCACCTGGAG ATCGTTTCTC CGGTGGTCGA GGGTTCAGTG
CGCGCGCGTC AGGATCGTCG CAACGATCCG AACGGTGACA AGGTTCTGCC GATTTCCCTC
CACGGCGATG CGGCTTTTGC CGGTCAGGGC GTGGTCATGG AAACCTTCCA GATGTCGCAG
ACTCGCGGCT TCAAGACGGG CGGCACGATC CACATCGTTA TCAACAACCA GGTCGGTTTC
ACCATCAGCA ACCCGCTGGA CTCGCGTTCC ACCGAGTACG CCACCGACGT TGCCAAGATG
ATTCAGGCGC CGATCCTCCA TGTAAATGGT GATGATCCGG AAGCCGTGAT GTTCGTCACC
CAGTTGGCGA TCGACTACCG CATGCAGTTC AAGCGGGACA TCGTCATCGA TCTGGTCTGC
TACCGCCGTC GCGGTCACAA CGAAGCTGAC GAGCCCAGCG GCACCCAGCC TCTGATGTAT
CAGCAGATCA CCAAGCAGCG CACCACCCGT GAGCTGTACG CCGAGCATCT GATCAAGACC
GGCGTCCTCG ATGAAGCCCG CGTTCAGGCC AAGGTCGATG ACTACCGCAG CGCGCTGGAC
AACGGCCTGC ACGTGGTGAA AAGCCTGGTC AAGGAGCCGA ACAAGGAATT GTTCGTCGAC
TGGCGTCCGT ATCTGGGCCA TGCCTGGACT GCGCGTCACG ACACCCGATT CGATCTCAAG
ACCCTGCAGG AACTGTCCGC CAAGCTGATG GAGTTGCCAG AAGGCTTCGT CGTGCAGCGT
CAGGTGCAGA AGATCTACGA AGATCGCCAG AAGATGCAGG CCGGTGGCTT GCCGATCAAC
TGGGGCTACG CCGAAACCAT GGCATACGCC ACGCTGGCGT TCGAAGGCCA CCCGATCCGC
ATGACAGGCC AGGACATCGG TCGCGGTACG TTCTCGCACC GTCACGCTGT GCTGCACAAC
CAGAAAGACG CCGGGACTTA CATTCCGCTA CAGAATCTGT ACGCCGGTCA GCCGCGTTTC
GACCTGTACG ACTCGTTCCT GTCGGAAGAG GCCGTGCTGG CATTTGAATA CGGTTACTCG
ACTACCCAGC CGGATGCACT GGTTATCTGG GAAGCGCAGT TCGGCGACTT TGCCAACGGC
GCCCAAGTGG TTGTCGACCA GTTCATCACC AGTGGTGAAC ACAAGTGGGG CCGTCTGTGC
GGTCTGACCA TGCTGTTGCC TCACGGCTAC GAAGGCCAAG GGCCGGAGCA CTCTTCGGCA
CGTCTTGAGC GCTACCTGCA ATTGTGCGCA GAGCACAACA TTCAGGTGTG CGTACCGACG
ACTCCGGCGC AGATCTACCA CCTGTTGCGT CGTCAGGTCA TCCGTCCGCT GCGCAAACCG
TTGATCGTGC TGACTCCGAA ATCGCTGCTG CGTCACAAGC TGGCTGTTTC GACGCTGGAA
GATCTGGCCG AAGGCTCGTT CCAGACCGTC ATTCCGGAAA TCGATACCCT CGATCCGGCC
AAGGTCACGC GTCTGGTGCT GTGCAGCGGC AAGGTCTACT ACGACCTGCT GGAAAAACGC
CGTGCCGAAG GTCGTGAAGA CATCGCTATC GTTCGTCTCG AGCAGCTGTA CCCGTTTCCT
GAAGACGACC TGATGGAAAC CATCGCGCCG TACACCAACC TGCAGCATGT GGTCTGGTGT
CAGGAAGAGC CGATGAACCA GGGTGCCTGG TACAGCAGCC AACACCATTT GCGTCGCAGC
ATGGGCAACC ACAAACGCGA ACTCGTTCTC GAGTACGCCG GTCGTGATGC TTCTGCCGCA
CCAGCCTGTG GTTACGCTTC GATGCACGCT GAGCAGCAGG AAAAACTCCT GCGCGATGCC
TTCACTGTTT AA
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| Protein sequence | MQESVMQRMW NSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPA DGSSATDVSH
STIRDHFVLL AKNQRRAQPV SAGSVSSEHE KKQVEVLRLI QAYRMRGHQA AQLDPLGLWQ
RPAPADLSIN HYGLTNADLD TTFRAGDLFI GKEEASLREI HEALQQTYCR TIGSEFTHIV
DSEQRNWFMQ RLESVRGRPA FSADIQSHLL ERVTAAEGLE KYLGTKYPGT KRFGLEGGES
LIPMLDELIQ RSGSYGTKEV VIGMAHRGRL NVLVNTFGKN PRDLFDEFEG KKKVELGSGD
VKYHQGFSSN VMTAGGEVHL AMAFNPSHLE IVSPVVEGSV RARQDRRNDP NGDKVLPISL
HGDAAFAGQG VVMETFQMSQ TRGFKTGGTI HIVINNQVGF TISNPLDSRS TEYATDVAKM
IQAPILHVNG DDPEAVMFVT QLAIDYRMQF KRDIVIDLVC YRRRGHNEAD EPSGTQPLMY
QQITKQRTTR ELYAEHLIKT GVLDEARVQA KVDDYRSALD NGLHVVKSLV KEPNKELFVD
WRPYLGHAWT ARHDTRFDLK TLQELSAKLM ELPEGFVVQR QVQKIYEDRQ KMQAGGLPIN
WGYAETMAYA TLAFEGHPIR MTGQDIGRGT FSHRHAVLHN QKDAGTYIPL QNLYAGQPRF
DLYDSFLSEE AVLAFEYGYS TTQPDALVIW EAQFGDFANG AQVVVDQFIT SGEHKWGRLC
GLTMLLPHGY EGQGPEHSSA RLERYLQLCA EHNIQVCVPT TPAQIYHLLR RQVIRPLRKP
LIVLTPKSLL RHKLAVSTLE DLAEGSFQTV IPEIDTLDPA KVTRLVLCSG KVYYDLLEKR
RAEGREDIAI VRLEQLYPFP EDDLMETIAP YTNLQHVVWC QEEPMNQGAW YSSQHHLRRS
MGNHKRELVL EYAGRDASAA PACGYASMHA EQQEKLLRDA FTV
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