| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2190 |
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| Symbol | |
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| ID | 1183841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2411039 |
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| End bp | 2412478 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393571 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | NP_792011 |
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| Protein GI | 28869392 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC TTTTGCTCTA TCAACGTATC GCTCAACAAC TTGCTGAAGA CATCCGTCGT
GGTGTGTACC AGCCCGGTGA GCGTGTGCCT TCTGTTCGCA AAATGAGCTC GCAGCTCAAT
GTCAGCCATG CAACGGTGTT GCAGGCCTAC GCGAACCTTG AGGATCAGGG CTTGATCAGG
GCGCGTCCGC AGTCGGGTTA CTACGTTCAC CAGACCCCTG CGTTGACGGC TTCGACGCCG
GACATCGCGC GGGTCGAGCG GCCAGGGCTG GTCACGCGCA GCAGCATTAT CCAGCAGGTG
CTTGAAGAGT CGCGACGCGA AGGCGTGTTC GCCCTGGGCG CAGCGGTGCC TCATGTGGAT
TACCTGCCGG TACGCGCCCT GCATCAGCAG CTTGCGAAAG TGACGCGCTT TCACAGTCCG
CGTGCGTTCA GTTACATGTT CAGTCCGGGC TTCGAGCCAC TGCGCAGGCA GGTTGCCATC
CGTATGCGCG ACGCGGGCGT AGTGGTTGAT CCATCCGAAG TGGTGATTAC TCACGGCTGT
GTGGATGCGT TGCAAATGAC CCTGCGTGTG CTGACCCGGC CTGGCGATCT GATCGCTGCC
GAGTCGCCGG CCTATTACGG CTTGCTGCAA CTCGCCGATC TGCTGGGCCT GAAAGTCATC
GAGATCCCCA GCGACCCGGC CACCGGCATC AGCCTGGAAG CCCTGCAATT GGCGGCCAAT
CAGTGGTCGA TCAAGGCTCT GGTGCTGACC TCGCGGCTGA GCAACCCGCT GGGCGGCACC
ATGCCTGAGG AGCGCCAGAA GAACTTGCTG CGGCTGGCCT CGGATTTTGA TATTCAGGTG
GTTGAAGACG ATGTCTACGG CGAGCTGATG TTCGAGGTCG GACGAACCAA GGCACTCAAG
GCGTTTGATC GGCTGGGCAG GGTGATTTAT TGCTCGAGCT TCTCCAAAAC GCTATCGCCC
GGTGTACGTA TCGGCTGGAC AATCGCGGGC AAATACCAGG CTGAAATTCA GCGTCTGCAG
ACTTTCAGCA CTCACTCGGC TTGCAGCGTC ACGCAAATGG CCGTAGCTGC CTACCTTGAA
AACGGCGGCT ATGACCGGCA TCTGCGCTTC ATTCGCCTGG AATACCGCAA GAACATGAGC
GCCTACCAAC TGGCGGTGCA GCAGTTCTTT CCTGAGGGCA CGCAGATGAG TCGTCCGGCG
GGCGGGTTTA TCTTGTGGGT CAGTCTGCCG GGGCGCGTCA ATACCCAGGA GCTGCATGTG
CGTGCGCTGG AGCAGGGCAT CAGCATCGCG CCGGGGCTGA TCTTCAGTAA CACCGAGCAG
TTCAACCACT GCATTCGCCT CAATTGCGGC ATGCCGTGGA ACAAAGAGGC TGAGCGCGCG
CTGATGACGC TGGGTATGTT GGCCAAGCAG TTGTGTCAGG AAGCGATACA GGTGTACTGA
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| Protein sequence | MTNLLLYQRI AQQLAEDIRR GVYQPGERVP SVRKMSSQLN VSHATVLQAY ANLEDQGLIR
ARPQSGYYVH QTPALTASTP DIARVERPGL VTRSSIIQQV LEESRREGVF ALGAAVPHVD
YLPVRALHQQ LAKVTRFHSP RAFSYMFSPG FEPLRRQVAI RMRDAGVVVD PSEVVITHGC
VDALQMTLRV LTRPGDLIAA ESPAYYGLLQ LADLLGLKVI EIPSDPATGI SLEALQLAAN
QWSIKALVLT SRLSNPLGGT MPEERQKNLL RLASDFDIQV VEDDVYGELM FEVGRTKALK
AFDRLGRVIY CSSFSKTLSP GVRIGWTIAG KYQAEIQRLQ TFSTHSACSV TQMAVAAYLE
NGGYDRHLRF IRLEYRKNMS AYQLAVQQFF PEGTQMSRPA GGFILWVSLP GRVNTQELHV
RALEQGISIA PGLIFSNTEQ FNHCIRLNCG MPWNKEAERA LMTLGMLAKQ LCQEAIQVY
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