| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2179 |
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| Symbol | |
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| ID | 1183830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2399075 |
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| End bp | 2400223 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393561 |
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| Product | mandelate racemase/muconate lactonizing enzyme family protein |
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| Protein accession | NP_792001 |
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| Protein GI | 28869382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0507727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA CCAAACTCAC CACGTTCATC GTTCCGCCAC GCTGGTGCTT CCTCAAGGTC
GAGACTGACG AGGGCGTTGT CGGCTGGGGC GAGCCGGTGG TCGAAGGTCG CGCACACACC
GTGGCCGCTG CTGTGGAGGA ACTGTCCGAT TACCTGATCG GCAAGGACCC GCGCAACATC
GAAGACATCT GGACCGTGCT GTATCGCGGC GGTTTTTACC GGGGCGGCGC GATCCACATG
AGCGCACTGG CCGGCATTGA TCAGGCGTTG TGGGACATCA AGGGCAAGGC GCTGGGTGTT
TCGGTGAGTG ATTTGCTGGG TGGCCAGGTG CGCGACAAGA TCCGTGTGTA CTCGTGGATC
GGCGGCGACC GTCCTGCCGA CACGGCGCGT GCAGCCAAAG AAGCCGTCGA GCGCGGCTTT
ACGGCGGTGA AAATGAACGG CACCGAGGAG CTGCAATTTC TCGACACCTT CGACAAGGTC
GATCTGGCGC TGGCCAATGT GGCTGCCGTG CGTGATGCGG TGGGGCCGAA TGTCGGCATT
GGTGTGGACT TCCATGGCCG CGTCCACAAG CCGATGGCCA AGGTGCTGAT GAAAGAGCTG
GATGCGTACA AGCTGATGTT CATCGAAGAA CCGGTGCTCA GCGAAAACTA CGAAGCCCTG
AAAGAACTGG CACCGCTGAC CAGCACGCCG ATTGCCTTGG GCGAACGGCT GTTCTCGCGC
TGGGATTTCA AGCGGGTGTT GAGTGAGGGC TATGTCGACA TTATTCAGCC GGATGCGTCG
CATGCGGGCG GTATCACCGA AACCCGCAAG ATCGCCAACA TGGCCGAAGC CTACGACGTC
GCGCTGGCGC TGCATTGCCC GCTGGGGCCG ATTGCGCTGG CGGCGTGCCT GCAACTGGAT
GCGGTTTGTT ACAACGCCTT TATCCAGGAA CAAAGCCTGG GCATTCACTA CAACGAAAGC
AACGACCTGC TCGATTACGT CAAGCATCCG GAAGTGTTCG ACTACGACAA AGGCATGGTC
AAGATCCCCA ACGGGCCGGG CCTGGGCATC GAAATCAACG AAGAATACGT CATCGAACGC
GCCGCCATCG GCCACCGCTG GCGCAACCCG ATCTGGCGTC ATGCCGATGG CAGTTTTGCG
GAGTGGTAG
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| Protein sequence | MKITKLTTFI VPPRWCFLKV ETDEGVVGWG EPVVEGRAHT VAAAVEELSD YLIGKDPRNI
EDIWTVLYRG GFYRGGAIHM SALAGIDQAL WDIKGKALGV SVSDLLGGQV RDKIRVYSWI
GGDRPADTAR AAKEAVERGF TAVKMNGTEE LQFLDTFDKV DLALANVAAV RDAVGPNVGI
GVDFHGRVHK PMAKVLMKEL DAYKLMFIEE PVLSENYEAL KELAPLTSTP IALGERLFSR
WDFKRVLSEG YVDIIQPDAS HAGGITETRK IANMAEAYDV ALALHCPLGP IALAACLQLD
AVCYNAFIQE QSLGIHYNES NDLLDYVKHP EVFDYDKGMV KIPNGPGLGI EINEEYVIER
AAIGHRWRNP IWRHADGSFA EW
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