Gene PSPTO_2174 details

Gene Information

• Locus tag: PSPTO_2174
• Symbol: leuD
• ID: 1183825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2394154
• End bp: 2394795
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637393556
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: NP_791996
• Protein GI: 28869377
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.478942
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCT TTACCCAGCA CAATGGCCTG GTCGCTCCGC TGGATCGCGC CAACGTCGAC 
ACCGACCAGA TCATCCCCAA GCAGTTTCTC AAGTCGATCA AGCGCACGGG CTTTGGCCCG 
AACCTGTTCG ATGAGTGGCG CTATCTGGAT GTGGGCCAGC CGTATCAGGA CAACTCCAAG 
CGCCCGCTGA ACCATGATTT CGTGCTCAAC AACGCACGTT ATCAGGGTGC CAGCGTGCTG 
TTGGCGCGGG AAAACTTCGG TTGTGGTTCC AGCCGCGAGC ACGCACCCTG GGCGCTGGAA 
GAGTATGGTT TTTGCGCCAT CATCGCCCCT AGCTATGCCG ACATCTTCTT CAACAACAGC 
TTCAAGAACG GCCTGCTGCC GATCATTCTG GCTGAAGACG ACGTCGATCA ACTGTTCAAG 
CAGGTCGAGG CCAGCCCTGG CTATCAGTTG AGAATTGATC TGCAGGCGCA GACAGTGACC 
CGCCCTGACG GCGAGGTGCT GAGCTTTGAA ATCGATGCAT TCCGCAAGCA CTGCCTGCTT 
AACGGTCTGG ATGACATCGG CCTGACGCTG ATGGACGCCG ACGCCATTGC CAGCTTTGAA 
GGCAAGCATC GCGCCAGCCA GCCATGGTTG TTTCGCGACT GA 

 

Protein sequence

MKAFTQHNGL VAPLDRANVD TDQIIPKQFL KSIKRTGFGP NLFDEWRYLD VGQPYQDNSK 
RPLNHDFVLN NARYQGASVL LARENFGCGS SREHAPWALE EYGFCAIIAP SYADIFFNNS 
FKNGLLPIIL AEDDVDQLFK QVEASPGYQL RIDLQAQTVT RPDGEVLSFE IDAFRKHCLL 
NGLDDIGLTL MDADAIASFE GKHRASQPWL FRD