| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2165 |
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| Symbol | |
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| ID | 1183812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2381162 |
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| End bp | 2382529 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393543 |
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| Product | group II intron, maturase |
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| Protein accession | NP_791987 |
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| Protein GI | 28869368 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.052518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAC AGCAGGCCAT GCATCAGATG CCCGGCAAAC CGGGGCGGGA CGCAATTGCA
GAGGGTGAAA CCCCGCGTAA AGCATCCAGC GATGAAGCCG GCTGTCCGCG CAATGACTCA
ACCCCCACAG GGTCAGGGTT GCTGCAAGCT GCCCTGACAA GAGACAACCT GCAACTGGCG
TTTAAACAGG TCCGCGCCAA TAAGGGTGCT GCCGGTGTCG ACGGTCTTGG GATCGTCGAA
ACAGCGGAGC ACCTGAAGAC GGCATGGCCC GGGATACGCG CACAGTTGTT GGCAGGGACG
TACCGGCCTG ATCCGGTTCG GCGAGTCTTG ATCCCCAAAC CCGGTGGCGG CGAGCGCAAG
CTGGGCATTC CTACGGTGAC GGACAGACTT ATTCAGCAAG CATTACTGCA AGTATTGCAG
CCCTTGCTGG ACCCTGACTT CAGCAACCAC AGCTATGGTT TTCGTCCGGA GCGCAGTGCA
CACCAAGCGG TTTTGGCGGC ACAGCAATAC ATCCACTCAG GGCGGCAAAT TGTGGTCGAT
GTCGATCTGG AGCAGTTTTT CGACTGCGTC GAGCACGATG TGCTGATCGC CCGGCTGGGC
AGAAAAGTGA AGGATCGCGA CGTTTTACGT TTGATTCGAG CTTATCTGAA CAGTGGGGCA
TTGATCGAAG GCATGGTCAT GACCAGCACG AGGGGCACAC CGCAAGGTGG ACCACTTTCA
CCGCTGCTGG CCAATGTGGT GCTGGACGAG GTAGACAAAG AGCTGGAGCG ACGAGGCCAT
TGCTTCGTCA GGTACGCGGA CGATGCGAAC GTTTACGTAC GTAGCCCCAA AGCCGGACAG
CGGGTGATGG CATTGCTCCG TCGCCTTTAC GGCCGTCTTG GGTTGCGCGT GAACGAGAGC
AAGAGCGCCG TTGCCAGTGC GTTTGGCCGC AAGTTTCTGG GATTCAGCTT CTGGCAGTCT
CCCAAAGGCG AGGTCAAACG GCGGGTAGCA CTCAAGGCGC TACAGGTATT CAAACATCGC
ATCCGGGGGC TGACACCGCG TAGTGGCGGT CGCAGCCTGC CGCAAGTGGT GGAAAACCTG
AGGCCCTACC TCCTCGGCTG GAAAGCGTAC TTTGGATTGT CTCAGGCTCC CGGTTTATGG
AAGAGTCTGG ACGGCTGGAT ACGTCGAAGG CTCAGGGCAA TTCAGCTCAA ACAATGGAAG
ACTGGCAAAA CCACCTACCG AGAGCTTCGC AAGCTGGGTG CAAATTCTGA CTTGGCGGCA
GCAATAGCCA GCGATAGCCA TAGGACCTGG CACAACAGTG CCGGGCTGAT CCATGGTGTG
CTGACGGTAG CGTGGTTTGA TCGGTTGGGT CTGCCTCGAC TCTACTGA
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| Protein sequence | MTIQQAMHQM PGKPGRDAIA EGETPRKASS DEAGCPRNDS TPTGSGLLQA ALTRDNLQLA
FKQVRANKGA AGVDGLGIVE TAEHLKTAWP GIRAQLLAGT YRPDPVRRVL IPKPGGGERK
LGIPTVTDRL IQQALLQVLQ PLLDPDFSNH SYGFRPERSA HQAVLAAQQY IHSGRQIVVD
VDLEQFFDCV EHDVLIARLG RKVKDRDVLR LIRAYLNSGA LIEGMVMTST RGTPQGGPLS
PLLANVVLDE VDKELERRGH CFVRYADDAN VYVRSPKAGQ RVMALLRRLY GRLGLRVNES
KSAVASAFGR KFLGFSFWQS PKGEVKRRVA LKALQVFKHR IRGLTPRSGG RSLPQVVENL
RPYLLGWKAY FGLSQAPGLW KSLDGWIRRR LRAIQLKQWK TGKTTYRELR KLGANSDLAA
AIASDSHRTW HNSAGLIHGV LTVAWFDRLG LPRLY
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