Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2154 |
Symbol | |
ID | 1183801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2364041 |
End bp | 2364889 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637393532 |
Product | hypothetical protein |
Protein accession | NP_791976 |
Protein GI | 28869357 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0257018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGGCC TGTTACTTGG AGGCACCGCC CTCGCCGCCA CGCCCGTCTC GGTGCCCGCG CCGGTGCCCG CGCCCGGTAA GACATTCAAG GACTGCAAGG ATTGCCCGGA AATGGTCGTG CTGCCTGCGG GCACGTTTAC CATGGGCGCG CCCGAGGAAG AAATGGGCCG CCAGCCTGAC GAAGGCCCGC TGCATGACGT GACCTTCGTC AAACCGTTCG CCATCAGCCA GTTTCAGGTA CTGGCCGGCG AATGGGACGC CTATATCAAA AGCTCCGGTT ACAAAATGCC GGACGGCGAC ACCCGTCCGG GCCGCGAGTG CAAGGCCGGC AAGCCACGCT ACCCGCTGAC CGCGCGCCAG CCCGCGGTGT GCATGGACTG GAACGAGGCC AAGGCCTACG TCGAATGGCT GTCCAAGAAG ACCGGCAAGT CTTACCACAT GGTCAGCGAA GCCCAGCGCG AATACGCGGC ACGCGGCGGC AGCAAGGGCT CGTTCCCGTT CCCGATGGAC GAAGGCAAGC CGTACAGCAT TGCCAAACAC GCCAACACCT ACGGCCCGGA AGACGGTTTC AGCTACACCG CGCCCGCTGG CAGCTACAGC CCCAACGCTT TCGGCATCTA CGACGCCCAC GGCAACGTCT ACGAATGGAC CGCCGATTGC GAGACCAGCA ATTACAACGG CGCGCCCACC GACGGCAGCG CGTGGCTGGC CGGCGATTGC ACCTGGAAGA TGATTCGCGG CAATGACTGG ACCGAAGCAC CGATCTTCTC CCGCTCCGGC AACCGCAACA GCCGCCAGCC CGACGTACGT GGCGACTGGC TGGGCTTTCG GGTCGCCCGC GACTTGTAA
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Protein sequence | MLGLLLGGTA LAATPVSVPA PVPAPGKTFK DCKDCPEMVV LPAGTFTMGA PEEEMGRQPD EGPLHDVTFV KPFAISQFQV LAGEWDAYIK SSGYKMPDGD TRPGRECKAG KPRYPLTARQ PAVCMDWNEA KAYVEWLSKK TGKSYHMVSE AQREYAARGG SKGSFPFPMD EGKPYSIAKH ANTYGPEDGF SYTAPAGSYS PNAFGIYDAH GNVYEWTADC ETSNYNGAPT DGSAWLAGDC TWKMIRGNDW TEAPIFSRSG NRNSRQPDVR GDWLGFRVAR DL
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