| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2152 |
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| Symbol | |
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| ID | 1183799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2359772 |
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| End bp | 2362003 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393530 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_791974 |
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| Protein GI | 28869355 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.101667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACC CGTCACGCCT CACCCCGCTC AGCAATGCGT TGCTGCTCCG TCAGATGTTC
CGTTCCCGGC CATCCATGGC GGCCATGGGT CTTGCGCTCT GCATGCCAGT CGCCACACAG
GCGCAGGAAG CCGCCGCAGA CGGTTCGACC CAGACAGCCA CGGTCAATCT GGCGCCGACT
GCAATCGACT CGCAGTACCT GGGCACCGCC ACTGACGGCA CCGGCTCGTA CACCACGGGC
GCGGTGAGCA TCGGCAAGGG CGCGCCGCAG TCGCTGCGTG AAACGCCGCA ATCGGTAAGC
GTGATGACTC GGCAGGTCAT GGATGACAAC AACCTCAACA GCTTGAGCAA AGTGCTGGAA
GACACCCCCG GTATCTCCTT CCAGTACCGC AACTTCGGCG GCCACGTGTA CACCTCTCGT
GGCTTCTCGT TGCTGGCGGA AAGCTTTCTG GTCGACGGCA TAGGCGGTCA GGGCTATCAG
ATCACCGGCT GGATGCAGCC GGACATGGCC ATTTATGACC GCGTGGAAGT GCTGCGAGGT
GCGTCCGGCC TGCTGGTCGG TGCCGGTCAG CCCGGCGGTG CGGTCAATCT GGTGCGCAAA
CGCCCGACGG CAGACAACAA GTTCTCGATC ACGACTCGCG CAGGTTCGTG GGACCAGTAT
CGCGTCGATC TGGACGGCAG CGGCAAGCTC AATGATTCGG GCACGGTGCG CGGGCGCATG
GTGGCGGCCT ACGATGACAG CGGTTCCTAC CTCGACGGCC GCGACAGCCG CACCCCGTTG
CTGTACGGCA TTGTCGAAGC CGACGTGAGC GATGACACCA CCCTGACCAT GAGCCTGCGC
CGCCAGGAAC AGGTCATCAA CGGCTACTCG ATCTACGGCC TGCCGCGCTA CAGCAACGGC
CAGTCGCTGG GTCTGTCGCG CTCGACCAAC CTGGCGCAGA AGTGGAACCG TCTCGAAAGC
GACATGACCG AGGTCTTTAC CGAAGTGGCG CACCGCTTCA ATGAAGACTG GATCAGCAAG
ACGTCGTTGA CCTATTCGCA GGGTGGGTTT GATCAGGCTA TTGCGTTTGC AAGGGGAGCG
GTCAACCCTA CGACACTGGC AGGCTCTACC TTCCAGAACA CACTCTTTCG CAGAGACGAA
GTGGACAGCA CCGGCCTGAA CACTCAACTG GAAGGAAACT TCAACGCTTT CGGCCTCGAG
CATCAGGTGA CGCTGGGCGC CGACTGGTCG AAACAGAACG CCAATACGCA TCAGGCTACT
GCCCCAACCC GATCCGCGAT CAACATTTTC GACGTCAACC AGAACGCTTT CGCCAAGCCA
GCGCGTCCGG CCTGGACCAC CGACATCGAC ACCACCGAAG AACGCGCGGG CCTGTACGCC
AACACGCGTA TTCACCTGAG CGAGCCGTTG AGCGTGGTGC TGGGCACTCG TCTGAGCTGG
TACGACTACA CGTACGACGT CAAAACCGGC GCAGCCAACA GTTACGAATC CAAACAGACC
CAGGAATTCA CCCCGTTCGC GGGCGTGATC TACGACATCA ATGACAGTTG GTCGTGGTAC
GCCAGCTACG CCGATATCTT CACACCGCAG GCCAACTATG TCACCGCTGG CGGCTCGCCA
CTGGACCCGG CCATCGGCTC CAACTACGAA ACCGGCTTCA AGGGTGAGCT GTTCGACAAG
CGCATGAACC TGTCGATGGC GCTGTTCTAC ATCAAGCAGA AAGATGTGGC CGGTGTCGAC
GTAAACACGA CTCAGCTCTG CCCGACCAGC TCCGACGGCT CCTGCTACCT GCAGGACGGC
ATCAGTCGCA GCAAGGGTGT CGACGTTGAA GCCAGCGGCG AAGTGCTGCC GGGACTGCAA
GTGTTCGGCG GCTATACCTT CAACATGCTG CGCAACAACG GTGACTCGGA TGTCGCGTAC
GAAACGCCGA AACACATGTT GCGCCTCAAC ACCAGCTACA ACCTGCCGGG CGCCTGGAAC
CGCCTGACGC TGGGCACCGG CGTGTCGGCG GATTCGGGCT ACGAAGTGCC GTCCAACAAA
CAGCTGGGTG TCGCTGGCAA GGCCGTCTGG GATGCGCGGG CCTCGTGGAA ACTGGACGAA
AACTGGAAAG TGTCGCTCAA CGCCGAAAAC CTCTTCGACC GCAAGTACTA CAGCACCTCG
ATCGCCAACG ACCGCTCCAA CGTCTACGGC GAACCGCGCA GCTACGTCCT GACCTTGCGG
GGGGATTTCT GA
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| Protein sequence | MHNPSRLTPL SNALLLRQMF RSRPSMAAMG LALCMPVATQ AQEAAADGST QTATVNLAPT
AIDSQYLGTA TDGTGSYTTG AVSIGKGAPQ SLRETPQSVS VMTRQVMDDN NLNSLSKVLE
DTPGISFQYR NFGGHVYTSR GFSLLAESFL VDGIGGQGYQ ITGWMQPDMA IYDRVEVLRG
ASGLLVGAGQ PGGAVNLVRK RPTADNKFSI TTRAGSWDQY RVDLDGSGKL NDSGTVRGRM
VAAYDDSGSY LDGRDSRTPL LYGIVEADVS DDTTLTMSLR RQEQVINGYS IYGLPRYSNG
QSLGLSRSTN LAQKWNRLES DMTEVFTEVA HRFNEDWISK TSLTYSQGGF DQAIAFARGA
VNPTTLAGST FQNTLFRRDE VDSTGLNTQL EGNFNAFGLE HQVTLGADWS KQNANTHQAT
APTRSAINIF DVNQNAFAKP ARPAWTTDID TTEERAGLYA NTRIHLSEPL SVVLGTRLSW
YDYTYDVKTG AANSYESKQT QEFTPFAGVI YDINDSWSWY ASYADIFTPQ ANYVTAGGSP
LDPAIGSNYE TGFKGELFDK RMNLSMALFY IKQKDVAGVD VNTTQLCPTS SDGSCYLQDG
ISRSKGVDVE ASGEVLPGLQ VFGGYTFNML RNNGDSDVAY ETPKHMLRLN TSYNLPGAWN
RLTLGTGVSA DSGYEVPSNK QLGVAGKAVW DARASWKLDE NWKVSLNAEN LFDRKYYSTS
IANDRSNVYG EPRSYVLTLR GDF
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