Gene PSPTO_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2123 
Symbol 
ID1183770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2296562 
End bp2297482 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID637393501 
Productsensor histidine kinase 
Protein accessionNP_791945 
Protein GI28869326 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.424772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGAAG AAAAAACCGC TGCGAAAACC CATGCCATGA CGCGGCTCAT GTCAGGCTTT 
ACCATCGACC AGGTGGTCTC GGAATTTCGC GCCTTGCGGG CCAGCGTCAT CAAGCTGTGG
ATGGCTCAGG AAATAGGCAA CACGCAGTCG CAACTTGGCG ACATGATCCG CTTCAACGAA
GCAATCGATC AGGCGCTCGC AGAGTCCATT TCCAGCTATA CCGGCGCGGT TCAGGCCTCG
CGCAATATCT TCCTGGGCAT CCTCGGGCAT GACTTGCGAA CCCCGCTAAG CGCCATACTG
CTGGGTGCCG ACGTGCTCCT GCGCACCAGT GATCTGGGGC CGAGATCGAC CAAGGTTGCC
TCAAGAATCT ATTCCAGCGT GAAACGAGCC AGCCAGATCG TCGGTGATCT TCTGGACTTC
ACTCGCTCAC AGATCGGTCC CGGCATACCG ATGAAAAAAA CCGAAATAGA CATTCAGCCC
GTTTGCGCCC GTATCGTCGA CGAGTCGCGC ACAGTCAACC CCGAGGCAGA CATTCGCCTG
ACGTCGATCG AACCGGTAGT CGGTGATTTC GATGGTGACC GGCTGGAGCA GGTCTTTTCA
AACCTCATCG GCAACGCCGT CCAGCACGGC AACAGCCGCG ATCCTGTCGA AGTTACCTTG
GCAGCCTCCG ACGGCACACT CCAATTCACC GTCCACAACA CCGGTACTCC AATCCCGGCA
GACGTACTGC CGTTCATTTT CAACCCGATG GGACGCTACT CACCCGAACA GATGACCGAC
AACGGCCCGT ATTCCAGCCT CGGGCTTGGC TTGTTTATCG TTGCGAGGAT AGTGGACGCT
CATGGTGGGC GCATCGAGGT AACATCGAAA GCAGAGCAGG GCACTACGTT TGCGGTGTTT
ATTCCGTTGA AGGCAGGGTG A
 
Protein sequence
MSEEKTAAKT HAMTRLMSGF TIDQVVSEFR ALRASVIKLW MAQEIGNTQS QLGDMIRFNE 
AIDQALAESI SSYTGAVQAS RNIFLGILGH DLRTPLSAIL LGADVLLRTS DLGPRSTKVA
SRIYSSVKRA SQIVGDLLDF TRSQIGPGIP MKKTEIDIQP VCARIVDESR TVNPEADIRL
TSIEPVVGDF DGDRLEQVFS NLIGNAVQHG NSRDPVEVTL AASDGTLQFT VHNTGTPIPA
DVLPFIFNPM GRYSPEQMTD NGPYSSLGLG LFIVARIVDA HGGRIEVTSK AEQGTTFAVF
IPLKAG