Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2123 |
Symbol | |
ID | 1183770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2296562 |
End bp | 2297482 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393501 |
Product | sensor histidine kinase |
Protein accession | NP_791945 |
Protein GI | 28869326 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.424772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCGGAAG AAAAAACCGC TGCGAAAACC CATGCCATGA CGCGGCTCAT GTCAGGCTTT ACCATCGACC AGGTGGTCTC GGAATTTCGC GCCTTGCGGG CCAGCGTCAT CAAGCTGTGG ATGGCTCAGG AAATAGGCAA CACGCAGTCG CAACTTGGCG ACATGATCCG CTTCAACGAA GCAATCGATC AGGCGCTCGC AGAGTCCATT TCCAGCTATA CCGGCGCGGT TCAGGCCTCG CGCAATATCT TCCTGGGCAT CCTCGGGCAT GACTTGCGAA CCCCGCTAAG CGCCATACTG CTGGGTGCCG ACGTGCTCCT GCGCACCAGT GATCTGGGGC CGAGATCGAC CAAGGTTGCC TCAAGAATCT ATTCCAGCGT GAAACGAGCC AGCCAGATCG TCGGTGATCT TCTGGACTTC ACTCGCTCAC AGATCGGTCC CGGCATACCG ATGAAAAAAA CCGAAATAGA CATTCAGCCC GTTTGCGCCC GTATCGTCGA CGAGTCGCGC ACAGTCAACC CCGAGGCAGA CATTCGCCTG ACGTCGATCG AACCGGTAGT CGGTGATTTC GATGGTGACC GGCTGGAGCA GGTCTTTTCA AACCTCATCG GCAACGCCGT CCAGCACGGC AACAGCCGCG ATCCTGTCGA AGTTACCTTG GCAGCCTCCG ACGGCACACT CCAATTCACC GTCCACAACA CCGGTACTCC AATCCCGGCA GACGTACTGC CGTTCATTTT CAACCCGATG GGACGCTACT CACCCGAACA GATGACCGAC AACGGCCCGT ATTCCAGCCT CGGGCTTGGC TTGTTTATCG TTGCGAGGAT AGTGGACGCT CATGGTGGGC GCATCGAGGT AACATCGAAA GCAGAGCAGG GCACTACGTT TGCGGTGTTT ATTCCGTTGA AGGCAGGGTG A
|
Protein sequence | MSEEKTAAKT HAMTRLMSGF TIDQVVSEFR ALRASVIKLW MAQEIGNTQS QLGDMIRFNE AIDQALAESI SSYTGAVQAS RNIFLGILGH DLRTPLSAIL LGADVLLRTS DLGPRSTKVA SRIYSSVKRA SQIVGDLLDF TRSQIGPGIP MKKTEIDIQP VCARIVDESR TVNPEADIRL TSIEPVVGDF DGDRLEQVFS NLIGNAVQHG NSRDPVEVTL AASDGTLQFT VHNTGTPIPA DVLPFIFNPM GRYSPEQMTD NGPYSSLGLG LFIVARIVDA HGGRIEVTSK AEQGTTFAVF IPLKAG
|
| |