Gene PSPTO_2121 details

Gene Information

• Locus tag: PSPTO_2121
• ID: 1183768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 2295503
• End bp: 2295946
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637393499
• Product: RulA protein, putative
• Protein accession: NP_791943
• Protein GI: 28869324
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTCA CATTCCTCGG CCCGCTTTCG GCAGGGGGCA TCAAGCTCCC GTTCATATCC 
ATGTCAGCGG TTGGCTCCCA GTCACCCGTG ATCGAGAGGC ACGTCTCGAT TGCGGAGTTG 
TGTGGCGTTC GCGAGCCGCA TGTCTACCTG GCCAGGGTCG AGGATGAGGG CATGCAAGGG 
TGCGGCATGT CCCGCGGCGA CATGCTGGTA GTCGATCGCA GTCAGTACGC AGAGCACGGT 
GATATCGTCG TCGCTTCGCT CAATACCCGG CAGATATGCC GACGGTTGCA CATGCGTGGT 
CACGTCGTGA TTCTGCAGTC CGAAAACGCA GACTACCCGC CGCTGCACGT GACCGACAAC 
GACGACCTGA TCATTCTGGG GGTCGTGACC TATAGCCTCA AAAGCCTTCT TGAAGGGCGC 
GCGGCGTGCT CGTCCCCTCG ATGA 

 

Protein sequence

MSVTFLGPLS AGGIKLPFIS MSAVGSQSPV IERHVSIAEL CGVREPHVYL ARVEDEGMQG 
CGMSRGDMLV VDRSQYAEHG DIVVASLNTR QICRRLHMRG HVVILQSENA DYPPLHVTDN 
DDLIILGVVT YSLKSLLEGR AACSSPR