Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2119 |
Symbol | tal |
ID | 1183766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2292928 |
End bp | 2293857 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393497 |
Product | transaldolase |
Protein accession | NP_791941 |
Protein GI | 28869322 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.449808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCCA AGCTGGATCA ACTCAAGAAA TTCACCACTG TTGTTGCCGA TACCGGCGAT TTCGGCGCCA TCAAAAGCCT CAAGCCTCAG GACGCCACGA CCAACCCTTC CCTACTGCTC AAGGCCGCTT CGAGCGAAAG CAACGATCAG ATGCTTGCCG ACGCGTTCAG CGGTGCCAAG GGCGACATCG GTCTGGCCTG CGACCGCTTT GCAGTTGCCA TCGGCCAGGA GATTCTCAAG GTTGTACCGG GTCGCGTGTC CACTGAAGTA GACGCACGCC TGTCGTTCGA CACCGACGCG CTGATCGAGC GCAGTGAGCG CATTATCGGC CTCTACGATA CTGCGGGCAT CAGTCGTGAT CGGGTACTGA TCAAGCTGGC GGCGACCTGG GAAGGTATTC GTGCTGCCGA GAAGCTCGAG AAGGACGGTA TTCAGACCAA CCTGACGTTG CTGTTTTCCT TCGCCCAGGC CGTTGCTTGC GCTGAAGCGG GCGTGTTTCT GATCTCGCCG TTCGTGGGCC GCATTTACGA CTGGTACAAG AAGTCGTCGG GCACCGATTA TGTCGGCGCA GACGATCCCG GCGTGCAGTC CGTGACGCGC ATCTACAACT ACTACAAGGC CAATGACTTC AAGACCGTGG TGATGGGTGC CAGCTTCCGC AATCTGAACC AGATCGAACA ACTGGCGGGC TGTGATCGCC TGACCATCAG CACCGAGTTG CTCAAGCAAC TGGCTGAAGA CACTGGCACG CTGGAGCAGA AACTTGCGCC GGGCAATGCA GGTGAAGCGC GTCAGAGCCT GACCGAGAGC CAGTTCCGCT GGGCGTCCAA CGAAGATGCC ATGGCCACTG AAAAACTGGC TGAAGGTATT CGTCAGTTCG CCCGCGATCA GGAAAAACTG GAAGCGCTGC TGTCTGCCAA AAAGTCCTGA
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Protein sequence | MTSKLDQLKK FTTVVADTGD FGAIKSLKPQ DATTNPSLLL KAASSESNDQ MLADAFSGAK GDIGLACDRF AVAIGQEILK VVPGRVSTEV DARLSFDTDA LIERSERIIG LYDTAGISRD RVLIKLAATW EGIRAAEKLE KDGIQTNLTL LFSFAQAVAC AEAGVFLISP FVGRIYDWYK KSSGTDYVGA DDPGVQSVTR IYNYYKANDF KTVVMGASFR NLNQIEQLAG CDRLTISTEL LKQLAEDTGT LEQKLAPGNA GEARQSLTES QFRWASNEDA MATEKLAEGI RQFARDQEKL EALLSAKKS
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