| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2118 |
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| Symbol | |
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| ID | 1183765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2292368 |
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| End bp | 2292853 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393496 |
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| Product | anti-anti-sigma factor, putative |
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| Protein accession | NP_791940 |
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| Protein GI | 28869321 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.430881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACCG GTAGAATCCA GTTCGCCGAG CAGGAAGGCA CCTTCGTTCT CAAGTTCGTG
GGTGAAGTGC GGTTGACGCT GTGTTCGGCC CTGGATGCGA CCATCGAGCG TATCTTCACT
GCGTTGAATT TTTCCGCAGT GGTGATCGAC CTCACCGAGA CGCGCAGCAT CGACAGCACC
ACGCTTGGCT TGCTGGCGAA GCTGTCGATT CTGTCGCGCC AGAAGGTAGG CCTGCTGCCG
ACGCTGGTCA CCACTCACGA AGACATCACG CGCCTGTTGC AGTCGATGGG CTTCGATCAG
GTGTTCAATA TCGTTGACCG GCCTCTGCCG CGTCCTGAGT GCCTGACTGA CCTGCCGTCA
CAGGATCAGT GCGAAGAAGT GGTCAAAGCC AAGGTGCTTG AAGCGCACAA GATACTGATG
GGCCTGAACG ACTCGAATCG TGAAGCATTC CACGATCTGG TCAACGCGCT GGAAGGTCAG
CGCTAG
|
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| Protein sequence | MSTGRIQFAE QEGTFVLKFV GEVRLTLCSA LDATIERIFT ALNFSAVVID LTETRSIDST
TLGLLAKLSI LSRQKVGLLP TLVTTHEDIT RLLQSMGFDQ VFNIVDRPLP RPECLTDLPS
QDQCEEVVKA KVLEAHKILM GLNDSNREAF HDLVNALEGQ R
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