| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2115 |
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| Symbol | |
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| ID | 1183762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2289830 |
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| End bp | 2290531 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393493 |
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| Product | vacJ lipoprotein, putative |
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| Protein accession | NP_791937 |
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| Protein GI | 28869318 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0452943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCGTCA CTGGTGCAGG CTTTATCAAG CGTTTGACGC AATTGTCCCT CTGCGCCGGC
ATGGCGCTGG TCCCGGTGGC CGTACAGGCA GCCGAAAGCG ATCCTTGGGA AGGCATCAAC
CGTTCCATTT TCAGCTTCAA CGATACCCTT GACGCTTATA CGCTCAAGCC GCTGGCAAAG
GGTTATCAGT ACATCGCTCC GCAGTTTGTC GAAGACGGTA TTCATAACTT CTTCAGCAAT
ATCGGCGATG TCGGCAATCT GGCGAACAAC GTCTTGCAGG CCAAACCTGA AGCGGCCGGT
GTAGATACCG CACGCCTTAT CGTCAACACT ACGTTCGGTC TGCTGGGCTT CATTGACGTC
GGCACCCGCA TGGGCCTGCA ACGCAGTGAT GAAGACTTCG GCCAGACACT GGGCTACTGG
GGTGTGCCAA GCGGCCCGTT CGTGGTGATT CCGCTGCTGG GCCCAAGCAC GGTGCGTGAC
GCCATTGCCA AGTACCCGGA CACCTACACC TCCCCGTACC GCTATATTGA TCACGTACCC
ACCCGCAACA CGGCGTTGGG CGTCAATCTG GTCGACACGC GTGCCAGCCT GCTGTCCGCC
GAGCGCCTGG TCAGTGGTGA TCGCTACACC TTCATCCGCA ACGCTTACTT GCAGAACCGC
GAATTCAAGG TCAAGGACGG GCAGGTCGAA GACGATTTTT AA
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| Protein sequence | MPVTGAGFIK RLTQLSLCAG MALVPVAVQA AESDPWEGIN RSIFSFNDTL DAYTLKPLAK
GYQYIAPQFV EDGIHNFFSN IGDVGNLANN VLQAKPEAAG VDTARLIVNT TFGLLGFIDV
GTRMGLQRSD EDFGQTLGYW GVPSGPFVVI PLLGPSTVRD AIAKYPDTYT SPYRYIDHVP
TRNTALGVNL VDTRASLLSA ERLVSGDRYT FIRNAYLQNR EFKVKDGQVE DDF
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