Gene PSPTO_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2111 
SymbollolE 
ID1183758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2286086 
End bp2287369 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID637393489 
Productlipoprotein releasing system transmembrane protein LolE 
Protein accessionNP_791933 
Protein GI28869314 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.386264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATTTTC ACGACGCTAT TTTCCACGGT GTTTCGCCAA TGTTCAGACC GTTACCCCTC 
TTTATCGGCA TGCGCTATAC CCGCGCCAAA CGCCGCAAAA GCTTCATTTC GTTCATTTCA
ATGACCTCGA TGATCGGTCT GGCACTTGGT GTGCTGGCGA TGATCGTGGT CTTGTCGGTG
ATGAACGGTT TCCAGCGGGA AATGAGCTCG CGGATTCTGG GCATGGTGCC GCATGCGGTG
ATCGCGGGCG CCAAGCCGGT GGATGACTGG AAGCCGCTGG CCGAAGCCGC CCTGAAAAAC
CCGGAAGTCA CTGCTGCCGT GCCGTTTACC GACATGGAAG GCATGCTCTC CTACAAAGGT
TCAATGCAAC CGATCCAGAT CAGCGGCGTC GATCCTGCGC TGGAACACGA AGTTTCCATC
GTCACTCAGC ACATCACCCG CGGCAGCCTC GCAGACCTGA AACCGGGCGA GTTCGGAGTG
GTGCTGGGTG ATCTCACTGC GCGGCGCTTT CGCCTGACCA TCGGCGACAA ACTGACCTTG
ATCGTGCCCG AAGTCAGCAG CGCGCCGGGC GGCATCACGC CGCGCCTGCA ACGCCTGACG
GTGGTGGGTA TCTTCAAGGT CGGCGCAGAG CTGGACGGCT CGATGGGACT GATCAACATC
GCCGACGCCG CGCAGATGCA GCGCTGGCAG CCTGATCAGG TGCAGGGCGT GCGTCTGGCG
CTCAAAGATC TGTACAAGGC GCCGCAGGTG TCTACGGCGA TCGCTTCGGG GCTGGGTGAG
GGCTATCACG CCGATGACTG GACTCACACA CAAGGCAGCC TGTTCAGCGC GATGAAAATG
GAAAAGACCA TGATCGGCCT GTTACTGCTG ATGATTGTCG CCGTTGCAGC GTTCAACATC
ATTGCCACGC TGATCATGGT GGTCAATGAC AAGGGCGCGG ACATCGCCAT CCTGCGCACC
ATCGGCGCGA CGCCGCGGCA GATCATGGCG ATCTTCATGG TTCAGGGCAC CGTGATCGGT
ATTGTCGGCA CGTTGATCGG GGGCGTTCTC GGCATCATTG CCGCCTTGAA CGTCAGCAGC
CTGGTGGGCT GGATCGAACG GGTCAGCGGC CAGCACATCT TCAGTTCCGA TGTGTACTTC
ATCAGCAACC TGCCTTCCGA GCTGCAAGGC GGCGATGTGT TGCTAATCTG CAGCGCCGGT
TTCATCCTGA GCTTTCTGGC CACGGTCTAC CCGGCATGGC GCGCCGCGCA GATCGAGCCG
GCGCATGCAC TGCGTTATGA GTGA
 
Protein sequence
MHFHDAIFHG VSPMFRPLPL FIGMRYTRAK RRKSFISFIS MTSMIGLALG VLAMIVVLSV 
MNGFQREMSS RILGMVPHAV IAGAKPVDDW KPLAEAALKN PEVTAAVPFT DMEGMLSYKG
SMQPIQISGV DPALEHEVSI VTQHITRGSL ADLKPGEFGV VLGDLTARRF RLTIGDKLTL
IVPEVSSAPG GITPRLQRLT VVGIFKVGAE LDGSMGLINI ADAAQMQRWQ PDQVQGVRLA
LKDLYKAPQV STAIASGLGE GYHADDWTHT QGSLFSAMKM EKTMIGLLLL MIVAVAAFNI
IATLIMVVND KGADIAILRT IGATPRQIMA IFMVQGTVIG IVGTLIGGVL GIIAALNVSS
LVGWIERVSG QHIFSSDVYF ISNLPSELQG GDVLLICSAG FILSFLATVY PAWRAAQIEP
AHALRYE