Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2107 |
Symbol | |
ID | 1183754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2282637 |
End bp | 2283359 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393486 |
Product | glycerophosphoryl diester phosphodiesterase, putative |
Protein accession | NP_791930 |
Protein GI | 28869311 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.909521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCTTA TCTACGGCCA CCGCGGCGCC AAGGGCGAAG CACCGGAAAA CACCCTGGTC AGCTTCCAGG AATGCCTCAA ACACGGCGTG CGCCGCTGTG AACTGGACCT GCATCTGTCA CTGGACGGCG AGTTGATGGT CATTCACGAC ACGACCCTCA AGCGCACCAC CGACCGGCGC GGCAAGGTCA ATGAGCATGC CGCCGCAGAC CTTGTGACCT ACGACGCGCG CAAGGGTGGC CCCGGCTGGG TCTCGCCCTG CCCGATTCCG CGCCTTGAAG AACTGTTCGA GCAGTGTGAC TTCGAGCACT GGCAGCTGGA AGTCAAAAGC GCCTCACGCA CCCGCGCAGC CAATACCGTG CTGGCGATTC GCGAAATGGT TCAGCGGCAT GGCCTGCTCG ACAAGGTCAC CATCACCTCC AGCTCCCGCG AAGTGCTGCG CGCCGCCCAG GACCTGACCC CGGACATCTC ACGCGGGCTG GTGGCCGAAT ACGCCTGGCT TGATCCGTTG AAGGTCGCAC AGAGCTACGG CTGTGAAATT CTGGCATTGA ACTGGACACT GTGTACCCCG GAGCGCCTGC AGAAAGCACA GCGTCAGGGC CTGCATGTGT CGGTGTGGAC AGTCAACGAG CCTGCACTGA TGCGCAGGCT CGCTGATTTC GGCGTCGACA GCCTGATTAC AGACTTTCCC GGTTTGGCCA CTGCCACGCT CGGGAATCGC TGA
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Protein sequence | MTLIYGHRGA KGEAPENTLV SFQECLKHGV RRCELDLHLS LDGELMVIHD TTLKRTTDRR GKVNEHAAAD LVTYDARKGG PGWVSPCPIP RLEELFEQCD FEHWQLEVKS ASRTRAANTV LAIREMVQRH GLLDKVTITS SSREVLRAAQ DLTPDISRGL VAEYAWLDPL KVAQSYGCEI LALNWTLCTP ERLQKAQRQG LHVSVWTVNE PALMRRLADF GVDSLITDFP GLATATLGNR
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