| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2105 |
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| Symbol | |
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| ID | 1183752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2280026 |
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| End bp | 2281057 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393484 |
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| Product | thiamine biosynthesis lipoprotein, putative |
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| Protein accession | NP_791928 |
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| Protein GI | 28869309 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGGCA TGGATTTGCG AGGGTTTTAC AGGATTGCAG CGTGCCTTGT GTTGCTGCTG
TGTGGTGGCT GTGGCCAGGA GCGCAAGCTG GAGAGCTTTG GCGGGCCAAC CATGGGCAGT
CACTATTCAG TGGTGTATGT CCGCGGTGCC GGGCAGCCTG ACCCGGTGGT AATGCGCCCG
GAGGTCGAAG CCATTCTGGC TGACGTCGAT CAACAGATGT CGCTGTGGCG CAGTGACTCG
GACATCGAGC GTTTCAATGC GCTGCCAGCC AACAGCTGCC AGATCATGTC CACGTCGGTT
TTGCACCTTA TCCGCGTTGG CGAGCAGCTG TCCCGTGAAA GCGACGGTGC TTTCGATTTG
ACCGTCAAGC CGCTGATGGA CTTGTGGGGG CTGGGCGCTC ATGCGCTGTT TGAACAGATG
CCGCTGGTGC GGCAGCTGGC CCGGACCCGT ACGCTGGTGG GTTATCGCAA CCTGCGCATC
GTCGGGCAGC AGTTGTGCAA GAACGCTGCC GTGCAAGTGG ACCTCAACAG CATCGCCGCC
GGTTACGCAG TAGACCGTAT CACTGAGCGG ATGGACGCGC TTGGCGTGCA CGACTACATG
GTCCAGGCCA CTGGCGAACT GAAAGTCAGC GGCCTCAAAC CCGATGGCTC GCCCTGGCGT
GTAAACCTTG ATGCACCGAG CGATGACGGG TACGACGCAC CAAAATTGTT CCCGCTCACT
GGCCACGCCA TGTCGACCTC GGGCGATTAT CGTCGTTACA GGGGCGGCAA CGGGCGGCAT
ATTTCCGACA CGCTCGACGC GTTGACCGGC AGTCCGGTCA ATCATGGTCT GGCCTCGGTG
ACAGTGCTTC ATCCCTCGGC GCTGATGGCT GACGGTCTCT CTTCGCTGCT GTTGATTCTC
GGCCCGGAGC GGGGCTGGAA TTATGCGCAA GAACACAAAA TCCCTGCTTT TTTTGTGATT
CGTGCCGATA AGCGCTTTAT CATTCGCAGC AACGCGTCGT TTGATCGCCT GGCTGTGAGG
TCGTCGCAGT AA
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| Protein sequence | MWGMDLRGFY RIAACLVLLL CGGCGQERKL ESFGGPTMGS HYSVVYVRGA GQPDPVVMRP
EVEAILADVD QQMSLWRSDS DIERFNALPA NSCQIMSTSV LHLIRVGEQL SRESDGAFDL
TVKPLMDLWG LGAHALFEQM PLVRQLARTR TLVGYRNLRI VGQQLCKNAA VQVDLNSIAA
GYAVDRITER MDALGVHDYM VQATGELKVS GLKPDGSPWR VNLDAPSDDG YDAPKLFPLT
GHAMSTSGDY RRYRGGNGRH ISDTLDALTG SPVNHGLASV TVLHPSALMA DGLSSLLLIL
GPERGWNYAQ EHKIPAFFVI RADKRFIIRS NASFDRLAVR SSQ
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