| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2103 |
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| Symbol | |
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| ID | 1183750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2276999 |
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| End bp | 2278261 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637393482 |
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| Product | hypothetical protein |
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| Protein accession | NP_791926 |
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| Protein GI | 28869307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.36255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTT CTGCCATGGA CGCTTCGCAG CAAAAGCTCA AGAGCAGCTT CTTGCTGCTG
TTTCTGACAA TTTTCATTCC CTTTGGCCTG GGGCATTTCG TTTCCTACCT GTTTCGTACC
GTCAATGCGG TGATCTACGT CGATCTGCAA ACCGACCTGA GCTTGCCCGC CAGCAGTCTG
GGTTTGCTGA CCGGCGTGTA CTTTCTGACC TTCGCCGCCG CGCAGATTCC GCTTGGCGTG
ATGCTCGACC GTTATGGCCC GCGCAGCGTG CAGGCGCCGA TGCTGCTGTT CGCGGTCGCC
GGTTCGGTCA TTTTCAGTGT CTCCAGTACC GAGACCGGAC TGTTGATCGG ACGTGGCCTG
ATCGGCCTGG GGGTGGCGGG TTCACTGATG AGTGCGATCA AGGCGTGTGC CATCTGGTTG
CCGGTCGAGC GTTTGCCGCT GAGCACCGCG TGCCTGCTGT CGATTGGCGG GCTGGGCGCG
ATGGCGTCGA CCGCACCATT GCATGCGTTG CTGAGCTGGT TGACCTGGCG AGAAGCGTTT
CTGGTTCTGG CGCTGCTGAC CTTTTGTGTG GTTGTGGTCA TACATTTCAG CGTTCCCAAA
GCCTACGAGA GCAGAAATAC TCGATACAGC GATATGTTTG CTGCGGTCGG CAAACTGTAC
TCGTCGTGGA CGTTCTGGCG TCTGGCGTTG TACTCGGTGT TCGCACACGC CATCTACATG
TCGGTGCTGT CATTGTGGAT GGGGCCGTGG TTGCGCGACA TGGCGGGTTT GAGTGATTCC
GCTATGGCCA GTGTGCTGTT GTTCGGGGCC ATCGCGATGG TGGCGGGGTC TCTGACGTTC
GGCGCGATCA CCGATTACCT GCGCAGGTTC GGCTTACAGC CGATCATGAT CTGTGGCACC
GGGATGGTCA TTTTCATCGG CTTCCAGGTG TTGATGGCCA GCGGCTTGCC GGTATCGCAT
TATCTGATTG CCATGGGCTT CAGCTTCTTC GGCACCTCGA CGACCATGAA CTACGCCATC
GTGGCGCAAT CGGTGTCGCC AGAACTGGCG GGCAGGGTCA GTTCGTCGTT CAATCTGGTG
GTGTTCGTGC TGGCGTTTTT TCTTCAGTGG CTGATGGGTG TGGTGCTCAA TCTGTGGCCA
GCGGCGCAGG GTGCCGGTCA TCCGCTTGAG GCCTATCAGT GGTCGCTGGG CCTGATGGTG
GCGTTGCAAT TGCCCGGCGT GTTGCTCTGG CTCAGCTTCC GCCCCTGGAA ACGCGCTGTC
TGA
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| Protein sequence | MSGSAMDASQ QKLKSSFLLL FLTIFIPFGL GHFVSYLFRT VNAVIYVDLQ TDLSLPASSL
GLLTGVYFLT FAAAQIPLGV MLDRYGPRSV QAPMLLFAVA GSVIFSVSST ETGLLIGRGL
IGLGVAGSLM SAIKACAIWL PVERLPLSTA CLLSIGGLGA MASTAPLHAL LSWLTWREAF
LVLALLTFCV VVVIHFSVPK AYESRNTRYS DMFAAVGKLY SSWTFWRLAL YSVFAHAIYM
SVLSLWMGPW LRDMAGLSDS AMASVLLFGA IAMVAGSLTF GAITDYLRRF GLQPIMICGT
GMVIFIGFQV LMASGLPVSH YLIAMGFSFF GTSTTMNYAI VAQSVSPELA GRVSSSFNLV
VFVLAFFLQW LMGVVLNLWP AAQGAGHPLE AYQWSLGLMV ALQLPGVLLW LSFRPWKRAV
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