Gene PSPTO_2079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2079 
Symbol 
ID1183725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2253384 
End bp2253746 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content58% 
IMG OID637393457 
Producthypothetical protein 
Protein accessionNP_791902 
Protein GI28869283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00863877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGC GTGAAGAAAT TCAGGCTGAA CTGGCGGAGG CGTTCGACGA TCCTGACGGC 
CTGGCTGACG CCGTACAGCA GTTCACTGGC GGCATAACCC TGCCGGGTAG CTGGGACCCT
GTCAGCGAAA TCAGCGGGCC ACCGACCGTT ATTGAATACA GCGGGCGCGG AATTTTCGGG
AGCTACAAGG CCAACCTGAT TGACGGTGAG AGCATCAAGG CATCAGACCA GCAACTAACC
GCGCTCACAA ACGAGGTGAC AGGCGTTCCG CAGGCAGGGC ACAAGATTAA CGGGTATGAC
GTGCTCGCGG TGGGTACCGA TCCGACAGCT GCCATCTATC AAATCCAACT GAGGCAAATC
TGA
 
Protein sequence
MGMREEIQAE LAEAFDDPDG LADAVQQFTG GITLPGSWDP VSEISGPPTV IEYSGRGIFG 
SYKANLIDGE SIKASDQQLT ALTNEVTGVP QAGHKINGYD VLAVGTDPTA AIYQIQLRQI