Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2079 |
Symbol | |
ID | 1183725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2253384 |
End bp | 2253746 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637393457 |
Product | hypothetical protein |
Protein accession | NP_791902 |
Protein GI | 28869283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00863877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCATGC GTGAAGAAAT TCAGGCTGAA CTGGCGGAGG CGTTCGACGA TCCTGACGGC CTGGCTGACG CCGTACAGCA GTTCACTGGC GGCATAACCC TGCCGGGTAG CTGGGACCCT GTCAGCGAAA TCAGCGGGCC ACCGACCGTT ATTGAATACA GCGGGCGCGG AATTTTCGGG AGCTACAAGG CCAACCTGAT TGACGGTGAG AGCATCAAGG CATCAGACCA GCAACTAACC GCGCTCACAA ACGAGGTGAC AGGCGTTCCG CAGGCAGGGC ACAAGATTAA CGGGTATGAC GTGCTCGCGG TGGGTACCGA TCCGACAGCT GCCATCTATC AAATCCAACT GAGGCAAATC TGA
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Protein sequence | MGMREEIQAE LAEAFDDPDG LADAVQQFTG GITLPGSWDP VSEISGPPTV IEYSGRGIFG SYKANLIDGE SIKASDQQLT ALTNEVTGVP QAGHKINGYD VLAVGTDPTA AIYQIQLRQI
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