| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2051 |
|---|
| Symbol | |
|---|
| ID | 1183696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 2232185 |
|---|
| End bp | 2232730 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393429 |
|---|
| Product | ankyrin domain protein |
|---|
| Protein accession | NP_791874 |
|---|
| Protein GI | 28869255 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0348951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT CAGCTATCAG CCAGTCGAAA ACCATGACCG AAGACGAGGC CGCAGAGTTC
GCCGAACAGG TATTCGACGT CGCTCGCCAG GGCAACGTCG TGATGCTGGA GCGTCTGCTG
GAAAAGGGCT TGCCAGCGGA TTTGCGTAAT CACAAGGGTG ACACGCTGCT GATGCTGGCC
AGCTACCACG GCCATCAGGA CGCGGTACGC GTGCTGCTGA ACCACAAGGC TGATCCTGAA
ATCCGCAATG ACAATGGCCA GAGCCCGATT GCAGGTGCCG CCTTCAAGGG CGACATGGCG
GTAGTCAAAT TGCTGGTAGA GGCGGGCGCC AACGTGGAAG GCGCGGCGGC TGACGGTCGC
ACCGCCTTGA TGATGGCTGC CATGTTCAAC CGCAATGAGA TAGTCGATTA CCTGATCGGC
CAGGGAGCGG ACCCGCATGC CTGCGATGCC AAGGGCATTA CCGCGTTGGG CGCGGCGCAG
GCAATGGGCG CAACCGTGAC GGCCGAGCAA CTGACCAGGC TGGGCGTGCA GGCTGCCCGG
GCCTGA
|
|---|
| Protein sequence | MTDSAISQSK TMTEDEAAEF AEQVFDVARQ GNVVMLERLL EKGLPADLRN HKGDTLLMLA
SYHGHQDAVR VLLNHKADPE IRNDNGQSPI AGAAFKGDMA VVKLLVEAGA NVEGAAADGR
TALMMAAMFN RNEIVDYLIG QGADPHACDA KGITALGAAQ AMGATVTAEQ LTRLGVQAAR
A
|
|---|
| |