| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2045 |
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| Symbol | |
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| ID | 1183690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2228465 |
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| End bp | 2229079 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393423 |
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| Product | class II aldolase/adducin domain protein |
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| Protein accession | NP_791868 |
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| Protein GI | 28869249 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0362341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGCG AACAACTGAG TCAGGAGATC ATCGAAGCAG GGCGGTTCCT GTATGGTCGT
GGCTGGTCGC CTGCCACCAG CAGCAATTAC TCCGTGCGCC TGTCGGCCAG CGAGGCGTTG
CTGACCGTGT CCGGCAAGCA CAAAGGCCAG CTGGGGCCGG ATGATGTGCT GGCGACAGAC
CTCGCTGGCA ACAGCCTGGA GCCCGGCAAA AAGCCGTCTG CGGAAACCTT GCTGCACACC
CAGCTTTACC TGTGCAGGCC GCAGGTCGGC GCAGTGCTGC ACACCCACTC GGTGAATGCG
ACGGTGCTGT CCAGGCTGAC GGCCTCAGAC CATCTGGTGT TCGAGGACTA CGAGCTGCAA
AAAGCCTTCA ACGGCGTGCT GACCCACGAG TCGCAGGTTG TCGTGCCGAT TTTCGACAAT
GATCAGGACA TCGCCCGGCT TGCCGCAAAC GTGCAGCCTT GGCTGGACGC TCATCCCGAG
TGCGCCGGCT ACCTGATTCG CGGCCACGGG CTCTACACCT GGGGCGCAAG AATGAGCGAC
GCACTGCGCC AGATCGAAGC GTTCGAGTTT CTGTTCGAGT GCGAGCTGAA GATGCGTACG
GTCATGAACC GTTAA
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| Protein sequence | MSREQLSQEI IEAGRFLYGR GWSPATSSNY SVRLSASEAL LTVSGKHKGQ LGPDDVLATD
LAGNSLEPGK KPSAETLLHT QLYLCRPQVG AVLHTHSVNA TVLSRLTASD HLVFEDYELQ
KAFNGVLTHE SQVVVPIFDN DQDIARLAAN VQPWLDAHPE CAGYLIRGHG LYTWGARMSD
ALRQIEAFEF LFECELKMRT VMNR
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