| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2039 |
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| Symbol | |
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| ID | 1183684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2222263 |
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| End bp | 2222853 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637393417 |
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| Product | isochorismatase family protein |
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| Protein accession | NP_791862 |
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| Protein GI | 28869243 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT TAAAGACCAT GTTCCAACTC AGCGGCCGGG TGCATGCGCC CGCCAACCTG
AGCAACGCGA CGCTGATTAT CATCGACGCC CAGAAAGAAT ACCTCAGCGG CCCGCTGGCC
CTGACCGGCG TCGACGAAGC GCTGGCCAAC ATCGGCCAAC TGGTCGCCAA GGCACGCGCG
GTCAAATGCC CGATTGTTCA CGTCCGCCAC CTGGGCACCG TGGGCGGCCT GTTCGATCCA
CAAGGCGAAC GCGGGCAACT GGTCCCGGAA CTGCTGCCGC AAGGCGACGA ACATCTGGTC
GAGAAACGCC TGCCCAACGC CTTTAACGGC ACAGGCCTGC ACGAACTGCT GCAAAGCCTC
GGGCATCTGG ATCTGGTCGT GTGCGGGTTC ATGAGCCATT CGAGCATCAG CACCACGGTT
CGCGCGACCA AGGACTACGG TTATCGCTGC ACACTGGTCG ACGATGCCTG CGCAACCCGC
GATCTGCCGA GCCCGCACGG GGTTGTCAGC GCGCAGGTGG TGCACAGAAC CGAAATGGCG
ATCATGGCCG ACAACTTCGC CACACTTGCG CTGACCAAAG ACCTGATCTG A
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| Protein sequence | MSDLKTMFQL SGRVHAPANL SNATLIIIDA QKEYLSGPLA LTGVDEALAN IGQLVAKARA
VKCPIVHVRH LGTVGGLFDP QGERGQLVPE LLPQGDEHLV EKRLPNAFNG TGLHELLQSL
GHLDLVVCGF MSHSSISTTV RATKDYGYRC TLVDDACATR DLPSPHGVVS AQVVHRTEMA
IMADNFATLA LTKDLI
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