| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2037 |
|---|
| Symbol | |
|---|
| ID | 1183682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 2221165 |
|---|
| End bp | 2221722 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637393415 |
|---|
| Product | Smr domain protein |
|---|
| Protein accession | NP_791860 |
|---|
| Protein GI | 28869241 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACG ACGATTTTTC CCTGTTCAGA AGCGAGACGC GCGGCGTAAA GCCGCTCAAG
CATGAACACG CCGATGTCGG CAAACCCAAA GCTGATCGAA AAATGCTGGC GCGCCTGCGC
CAGTCGGCAA CCGTGCGTAC CGATTCGGTC ATCGTCGACG GTCTTTCGGA TCAGTTCGTG
ATCGATGTCG GCCCGGAAGA TGTCCTGAGC TGGTCGCGTG ACGGCGTGCA GGAAGGCCAG
ATGCGCAAGC TCAAGCTCGG CCAGATCAGC TTCGAGGGCG GCCTGGACCT GCACGGCATG
ACCGTGGAAG TCGCTCGCGA AACGTTATGG GAGTTTCTCG CCGAAGCTAC CCGGCTGGAA
ATACGCTGCG TGCGTGTGAC ACACGGCAAG GCGGTGCGCC TGGACGGCAA ACGTCCGATG
ATCAAGAGCC ACGTCAACAC CTGGCTGCGT CAGCATCCGC AGGTGTTGGG CTTTTGCTCG
TGCCTGGCCA AACATGGCGG CGCGGGCGCG GTTTATGTGG TGCTCAAACG CACCATGATG
GAAGGACGTG ACGAGTAA
|
|---|
| Protein sequence | MQDDDFSLFR SETRGVKPLK HEHADVGKPK ADRKMLARLR QSATVRTDSV IVDGLSDQFV
IDVGPEDVLS WSRDGVQEGQ MRKLKLGQIS FEGGLDLHGM TVEVARETLW EFLAEATRLE
IRCVRVTHGK AVRLDGKRPM IKSHVNTWLR QHPQVLGFCS CLAKHGGAGA VYVVLKRTMM
EGRDE
|
|---|
| |