Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2032 |
Symbol | |
ID | 1183677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2218643 |
End bp | 2219245 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637393410 |
Product | glutathione S-transferase family protein |
Protein accession | NP_791855 |
Protein GI | 28869236 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.22229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAGG TTTATGGCGA TTACAACTCG GGCAACTGCT ACAAGGTCAA GCTGATGCTT AACCTGCTGG GCAGCGAGTA CGAGTGGGTG CCGGTCAATA TTCTCAACGG CGAAACCCAG ACCCCGGCGT TTCTGGAAAA AAACCCCAAC GGCAAGATTC CGGTCCTGGA GCTGGACGAC GGCACCTGCC TGTGGGAGTC CAACGCGATT CTCAATTTTC TCGCCGATGG TTCCAGGTAC TTGCCAAGCG AGCCACGTTT ACGGACTCAA GTGCTGCAAT GGCAGTTCTT CGAGCAATAC AGCCACGAAC CGTCAGTGGC CGTCGCGCGT TTCATACAGT TCTACCTGGG CTTGCCTGCC GAACGCATGG TCGAATATCG CGCCATGCAG AAGTCCGGCT ATCGAGCGCT GGCGGTCATG GAGCAGCAGC TTCATCGCAC ACCGTTTCTG GTCGGTGACA ATTTCTCCAT CGCCGACATC GCCTTGTATG CCTACACCCA CGTAGCGCAT CAGGGTGGTT TTGACCTGGA ACCCTACACG GGCATTCGCC GCTGGTTGAA GCGGGTCGAG GCTGAACCGG GCTATATCGG CATGCTGGAC TGA
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Protein sequence | MYKVYGDYNS GNCYKVKLML NLLGSEYEWV PVNILNGETQ TPAFLEKNPN GKIPVLELDD GTCLWESNAI LNFLADGSRY LPSEPRLRTQ VLQWQFFEQY SHEPSVAVAR FIQFYLGLPA ERMVEYRAMQ KSGYRALAVM EQQLHRTPFL VGDNFSIADI ALYAYTHVAH QGGFDLEPYT GIRRWLKRVE AEPGYIGMLD
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