Gene PSPTO_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2029 
Symbol 
ID1183674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2215916 
End bp2217076 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content57% 
IMG OID637393407 
Productoxidoreductase, zinc-binding protein 
Protein accessionNP_791852 
Protein GI28869233 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.123279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCATC TGCAGATCAA TATGAACGTC ATAGCCACTG AGCACTCCTA TCAACCACAT 
GGATCAAACG GCATTCGCTG GATGATCCGT TCTTGCCTGA ACACCGCTCC GAGGCTTGAA 
TCCACCCATA AACCACTGTT ACGAGGCCCC GCCATGACTG ATTTATCCAA CCGCCAGTTC 
CTGCTCGCCA AGCGTCCTTC GGGCGCTGTA CGCCGTGATG ACTTCACCTA TCAGCAAGTG 
CCTGTCACCT CATTGGCAGA CGGGCAGATT CTGGTCAGAA ACAAATTCCT GTCGCTTGAT 
CCGGCAATGC GGGGCTGGAT GAATGACGGC AAGTCCTATA TTCCGGCGGT GCAACTGGGC 
GAGGTGATGC GCGCGCTGGG TGTGGGCGAA GTGCTTGAAT CGAAGAACCC GAAATTTGCC 
GCAGGCGATC ACGTCCAGGG TGCGCTTGGC ACTCAGGATT ACTTTGCAGG CGAGCCGAAG 
GGTTTCTATA AGGTCGATAC CAGCCTTGCA CCGTTGCCGC TGTACCTGTC GGCACTGGGC 
ATGACCGGCA TGACCGCCTA CCTGGCGCTG CTGGATGTCG GTCAGCCGAA AAGCGGTGAC 
ACCGTATTGA TTTCCGGCGC AGCAGGCGCG GTCGGCAGCA TTGCCGGGCA GATTGCCAAG 
CTCAAGGGCT GCCGAGTGGT CGGCATCGCC GGCGGCAAGG ACAAATGCAG CCTGCTGACC 
AGCGAGCTGG GGTTCGATGC GGCCATCGAT TACAAGTCCG AAGATGTCAT GGACGCGATC 
AAGCGTCATT GCCCGGACGG CGTGAACGTG TACTTCGATA ACGTCGGCGG CGATATTCTC 
GATGCAGCAC TCAGCCAGTT GGCAGTCGGT GCGCGCGTGG TGATTTGCGG TGCCATCAGC 
CAGTACAACA ACACCACAGC CATCAAAGGC CCGGCCAATT ACATGTCATT GCTGGTCAAC 
CGCGCTCGCA TGGAGGGCTT CATTGTGCTG GACCACGCCG ACCGCTTTGC CGAAGCAGGT 
CAGGTCATGG CCGGCTGGAT CAAGGAAGGC AAGCTCAAGA GCAAGGAGCA TATCGTAGAA 
GGCCTGGAGA CATTCCCGGA GACCTTCCAG ATGCTGTTCA ATGGTGAAAA CCAGGGCAAG 
CTGATATTGA AAGTTGAATA A
 
Protein sequence
MCHLQINMNV IATEHSYQPH GSNGIRWMIR SCLNTAPRLE STHKPLLRGP AMTDLSNRQF 
LLAKRPSGAV RRDDFTYQQV PVTSLADGQI LVRNKFLSLD PAMRGWMNDG KSYIPAVQLG 
EVMRALGVGE VLESKNPKFA AGDHVQGALG TQDYFAGEPK GFYKVDTSLA PLPLYLSALG 
MTGMTAYLAL LDVGQPKSGD TVLISGAAGA VGSIAGQIAK LKGCRVVGIA GGKDKCSLLT 
SELGFDAAID YKSEDVMDAI KRHCPDGVNV YFDNVGGDIL DAALSQLAVG ARVVICGAIS 
QYNNTTAIKG PANYMSLLVN RARMEGFIVL DHADRFAEAG QVMAGWIKEG KLKSKEHIVE 
GLETFPETFQ MLFNGENQGK LILKVE