| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2028 |
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| Symbol | pyrF |
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| ID | 1183673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2215104 |
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| End bp | 2215742 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637393406 |
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| Product | orotidine 5-phosphate decarboxylase |
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| Protein accession | NP_791851 |
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| Protein GI | 28869232 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCTGG CTGATCAGCT CGACCCCAAG CTGTGCCGGG TCAAGGTTGG CAAGGAGCTG
TTCACCAGCT GTGCGTCGGA CATCGTCGAG GCCCTTCGCG GCAAGGGCTT CGATGTTTTT
CTGGATCTCA AATTTCATGA CATTCCCAAC ACCACGGCGA TGGCGGTCAA GGCCGCTGCC
GAGATGGGCG TGTGGATGGT CAACGTGCAT TGCTCGGGCG GGCTGCGCAT GATGGCAGCG
TGCCGGGAAG TGCTGGAGCA GCGCACCGGT CCTCAGCCTT TGCTGATCGG CGTGACCGTA
CTCACCAGTA TGGAGCGTGA AGACCTTGCC GGTATCGGCC TGGATATTGA TCCGCAAGTA
CAGGTGCTGC GCCTGGCAGC GCTGGCTGAA AAAGCCGGTA TGGATGGCCT GGTCTGTTCG
GCGCTGGAAG CCCAGGCCCT TAAAGCCGCT CACCCGTCAC TGCAGCTGGT CACCCCAGGC
ATTCGCCCGG CGGGCAGCGC ACAGGACGAT CAACGTCGCA TTCTGACCCC GCGCCAGGCA
CTGGACGCGG GTTCCGACTA CCTCGTGATC GGCCGGCCGA TCAGCCAGGC AGCGGACCCG
GCCAAGGCAC TGGCCGCAGT GGTTGCCGAA CTGGCCTGA
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| Protein sequence | MRLADQLDPK LCRVKVGKEL FTSCASDIVE ALRGKGFDVF LDLKFHDIPN TTAMAVKAAA
EMGVWMVNVH CSGGLRMMAA CREVLEQRTG PQPLLIGVTV LTSMEREDLA GIGLDIDPQV
QVLRLAALAE KAGMDGLVCS ALEAQALKAA HPSLQLVTPG IRPAGSAQDD QRRILTPRQA
LDAGSDYLVI GRPISQAADP AKALAAVVAE LA
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