Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2026 |
Symbol | |
ID | 1183671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2213388 |
End bp | 2214752 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393404 |
Product | ethanolamine permease family protein |
Protein accession | NP_791849 |
Protein GI | 28869230 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | [TIGR00908] ethanolamine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.169235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGC AACTCAAGCC TACGCTAGGC ACGATACATC TATGGGGGAT TGCCGTCGGG CTGGTGATCT CCGGCGAATA CTTCGGCTGG AGTTACGGCT GGGGGGCAGC CGGGACCCTG GGCTTTTTGG TAACGGCCCT GATGGTTGCA ACCATGTACA CCTGTTTCAT ATTCAGTTTT ACCGAACTGA CCACCGCCAT TCCTCACGCA GGCGGGCCGT TTGCCTACAG CCGCCGCGCC TTCGGAGAAA AAGGCGGGTT GATCGCCGGC ATGGCGACCC TGATCGAATT CGTCTTTGCG CCACCGGCCA TCGCCATGGC CATTGGTGCC TATCTCAACG TTCAGTACCC GGGCCTTGAC CCCAAACACG CGGCGGTCGG TGCCTATATC GTGTTCATGG CGCTCAATAT CGTAGGCGTG AAACTGGCTG CAACCTTTGA ACTGGTGGTG TGCATCCTCG CAGTCGCCGA GTTGCTGGTG TTCATGGGCG TGGTCGCGCC AGCCTTCAGC TTCAGCAATT TTGCCCTCAA TGGCTGGGCG GGCTCGCAGA CTTTCGGGCC GCAAGCCATC GCCGGCATGT TCGCCGCCAT CCCGTTTGCC ATCTGGTTTT TCCTGGCCAT CGAAGGCGCG GCAATGGCTG CCGAAGAAGC CAAGGACCCG AAACGTACCA TCCCCAAAGC CTACATCAGC GGCATTCTGA CTTTGGTGTT TCTGGCCATC GGCGTCATGC TGTTTGCCGG CGGGGTCGGT GACTGGCGCA CCTTGGCCAA CATCAACGAC CCGCTGCCAC AGGCCATGAA GGCGGTGGTC GGTGACAACT CCGGCTGGCT GCACATGCTG GTGTGGATTG GCCTGTTCGG CCTGGTAGCC AGCTTCCACG GCATCATCAT GGGCTACTCG CGGCAGTTCT TCGCCCTGGC CCGCGCCGGT TACCTGCCTT CGTCACTGGC CAGACTGTCA CGCTTTCAGA CCCCGCACCG GGCAATCATC GCGGGCGGCC TTATCGGTAT CGCCGCCATC TACAGTGACG GCCTGATCAA TCTGAGCGGC ATGACGCTGA CCGCTGCAAT GATCACCATG GCGGTGTTCG GGGCCATCGT CATGTACATC ATGAGCATGC TCAGCCTGTT CAAACTGCGC AAGACCGAAC CGAATCTGGA ACGCAGCTTC CGTGCGCCTG GCTACCCTGT GGTGCCTGGC ATTGCGCTGG CGCTGGCAGT CGTGTGCCTG GTGGCAATGG CCTGGTTCAA CATGCTGATC GGCGTGATTT TTCTGGGTCT GATGGCCATC GGGTTCATCT ATTTCAGTCT GACGGCCAAA TCGCGCGCCG ATGCACCGGC CGATTCGATG CTTACCGGCC AGTAA
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Protein sequence | MSTQLKPTLG TIHLWGIAVG LVISGEYFGW SYGWGAAGTL GFLVTALMVA TMYTCFIFSF TELTTAIPHA GGPFAYSRRA FGEKGGLIAG MATLIEFVFA PPAIAMAIGA YLNVQYPGLD PKHAAVGAYI VFMALNIVGV KLAATFELVV CILAVAELLV FMGVVAPAFS FSNFALNGWA GSQTFGPQAI AGMFAAIPFA IWFFLAIEGA AMAAEEAKDP KRTIPKAYIS GILTLVFLAI GVMLFAGGVG DWRTLANIND PLPQAMKAVV GDNSGWLHML VWIGLFGLVA SFHGIIMGYS RQFFALARAG YLPSSLARLS RFQTPHRAII AGGLIGIAAI YSDGLINLSG MTLTAAMITM AVFGAIVMYI MSMLSLFKLR KTEPNLERSF RAPGYPVVPG IALALAVVCL VAMAWFNMLI GVIFLGLMAI GFIYFSLTAK SRADAPADSM LTGQ
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