Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2023 |
Symbol | |
ID | 1183668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2211408 |
End bp | 2211950 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637393401 |
Product | exonuclease, putative |
Protein accession | NP_791846 |
Protein GI | 28869227 |
COG category | [R] General function prediction only |
COG ID | [COG5018] Inhibitor of the KinA pathway to sporulation, predicted exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0659436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCATT GGCTGGTGAT TGATCTGGAG GCGACTACCG AAGAAGGTGG CTGGCCGGTC GCAGAAATGG AAGTCATCGA GATAGGTGCG ACGCTGGTCA ATCAGGATGG GCGCGAGCTG GACCATTTCG AACGCTTCGT ACGCCCCGCA CGCAGGCCGC TGTTGACTCA TTTTTGCAAG GAGCTGACCC ATATCAGCCA GAGCAACATC GACAGCGCTG CGCCGCTGAC CACCGTATGG CCGCAGTTCG AGCGCTGGCT GAGCCATCAT CGCGCCCGAG TAGTGGGCTG GGCCAGTTGG GGGGATTATG ATCGTCAGCA ACTGGAAGAA GAATGGCGCC GTCATCAACT TGGCAGTGCG TTGTCCAGCA TGCCGCATGT CAATCTCAAA CAACGTTTCG CACAAGCCCG TCAGTTGCAA AAACCGGTGG GGCTGAACAG TGCGTTGCAG CTGGCGGGTA TGCAGTTCAG CGGGCAACAG CACAGGGCGC TGGTAGATGC GCGTAATACC GCCAGGCTTT TGCCGCTGAT TCTGCCCAAC TGA
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Protein sequence | MPHWLVIDLE ATTEEGGWPV AEMEVIEIGA TLVNQDGREL DHFERFVRPA RRPLLTHFCK ELTHISQSNI DSAAPLTTVW PQFERWLSHH RARVVGWASW GDYDRQQLEE EWRRHQLGSA LSSMPHVNLK QRFAQARQLQ KPVGLNSALQ LAGMQFSGQQ HRALVDARNT ARLLPLILPN
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