| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2021 |
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| Symbol | |
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| ID | 1183666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2209190 |
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| End bp | 2210959 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393399 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_791844 |
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| Protein GI | 28869225 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.47227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAC TGGTTTCCAG GCGTCAACGC CAGGCGATTC GTCTGGCCGC AAGTTTTATC
GCACCTTACC GCTGGCAGGC GCTTGGCGCA TTGTTGGCAC TGGTCGTTAC TGCGGGCATC
ACGCTGTCGA TCGGGCAGGG CATCAAGTTG ATGATCGATC AGGGTTTCAT GACCCGTTCG
CCGCAATTGC TCGAACGCTC GATCGGGTTC TTCATGCTGC TGACGGTGGG CCTGGCCATA
GGCACTTTCA GTCGCTTTTA TCTGGTGTCG TGGATCGGCG AGCGTGTGGT GGCGGATCTG
CGCAAGAAGG TCTTTGACCA CTTGATCGAA CTGCATCCGG GGTTTTATGA AAACAACCGT
AGTTCGGAAA TCCAGTCGCG CCTGACCGCC GACACCACGC TGTTGCAGTC GGTCATCGGC
TCGTCGCTGT CGATGTTCCT GCGCAATGCT TTGATGGTCG TCGGCGGGAT CGTACTGCTG
TTCATCACCA ACCCCAAGCT CACCAGCATC GTGGTGGTGG CCTTGCCGTT GATCATCGCG
CCGATTCTCA TGTTCGGTCG GCGAGTGCGC ACTCTGTCGC GCGAGAGCCA GGACCGCGTC
GCCAATGTCG GCAGCTATGT GGCCGAGGCG TTGGGGCAGA TCAAGACGGT GCAAGCCTAT
AACCATCAGC AACAGGACAA ACAGCGTTTT GCCCACACCG TCGAACAGGC GTTCGATACC
GCGCGCAAGC GAATCCTGCA ACGCTCCTGG CTGATCACGC TGGTTATCGT TCTGGTGCTG
GGGGCGGTGG CGGTGATGTT GTGGGTGGGC GGCATGGATG TGATCAGCGG CCGCATTTCC
AGTGGTGAAC TGGCGGCCTT CGTGTTTTAC GCGCTGGTGG TCGGTATGGC GTTCGGCACG
TTGAGCGAGG TGATCGGCGA GCTGCAGCGC GCCGCCGGTG CGGCCGAGAG GATCGGCGAG
TTGCTGCAGG CGCGCAGCGA GATCAGCGCG CCAACCACCG GTCTGCAGAC CCTGCCGCAA
CGTATCAGCG GCGGGCTTGC ACTGGAGGGC GTCAGTTTCG CCTATCCGTC GCGCCCCGAG
CGTAATGCGG TCGATGACCT GACCCTGACC GTAGAGCCCG GCGAAACCCT GGCTTTGGTA
GGGCCGTCCG GCGCGGGCAA GTCAACGATC TTCGACCTGC TGCTGCGTTT TTACGACCCA
GGCTGTGGAC GCATTCTGAT CGAGGGCGTG CCGGCCGTGC AGCTCGATCC CCATGACCTG
CGTCGCTGCT TTGCAATGGT GTCGCAAACG CCTGGTTTGT TTTTTGGCAG CGTCGAGGAC
AACATTCGTT ACGGCAACGT CAACGCAAGC TTTGAACAGG TGCAGGCAGC GGCACGTATC
GCCCATGCCC ACGAGTTCAT TCTGGAAATG GCTGACGGTT ACCGCACTCA TCTGGGCGAG
GGCGGGCTGG GGTTGTCGGG TGGGCAGCGC CAGCGTCTGG CGATTGCTCG TGCCTTGCTG
GTCGATGCGC CGATTTTACT GCTGGACGAG GCTACCAGCG CGCTGGATGC GCAAAGCGAA
CACCTGATTC AACAAGCCTT GCCCAGCTTG ATGAAAGGCC GTACCACGCT GGTCATCGCT
CACCGTCTGG CGACGGTGCA GAATGCTGAC CGCATCGCGG TGATGGATCA AGGGCAACTG
GTGGCGGTAG GCACTCATCA GCAACTGATT GCCAGCAACC CGCTGTATGC ACGGCTGGCG
GCGTTGCAGT TCAATGCCGG TGTCGAATAA
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| Protein sequence | MISLVSRRQR QAIRLAASFI APYRWQALGA LLALVVTAGI TLSIGQGIKL MIDQGFMTRS
PQLLERSIGF FMLLTVGLAI GTFSRFYLVS WIGERVVADL RKKVFDHLIE LHPGFYENNR
SSEIQSRLTA DTTLLQSVIG SSLSMFLRNA LMVVGGIVLL FITNPKLTSI VVVALPLIIA
PILMFGRRVR TLSRESQDRV ANVGSYVAEA LGQIKTVQAY NHQQQDKQRF AHTVEQAFDT
ARKRILQRSW LITLVIVLVL GAVAVMLWVG GMDVISGRIS SGELAAFVFY ALVVGMAFGT
LSEVIGELQR AAGAAERIGE LLQARSEISA PTTGLQTLPQ RISGGLALEG VSFAYPSRPE
RNAVDDLTLT VEPGETLALV GPSGAGKSTI FDLLLRFYDP GCGRILIEGV PAVQLDPHDL
RRCFAMVSQT PGLFFGSVED NIRYGNVNAS FEQVQAAARI AHAHEFILEM ADGYRTHLGE
GGLGLSGGQR QRLAIARALL VDAPILLLDE ATSALDAQSE HLIQQALPSL MKGRTTLVIA
HRLATVQNAD RIAVMDQGQL VAVGTHQQLI ASNPLYARLA ALQFNAGVE
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