Gene PSPTO_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2012 
Symbol 
ID1183657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp2198423 
End bp2198959 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content53% 
IMG OID637393390 
Producthypothetical protein 
Protein accessionNP_791835 
Protein GI28869216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA ACAAGTCCAC GGATGTCGCT GCGCGCACCC AACTAGAAAA AAACGGCCCC 
GAAAACGCAA GCATTGTTCA AGAAGCTCCA CTACACGAGA GTCTCTATCG ACAGGCGATT 
GCTGTGCACA TTCCATCCGA TATTTCAGAC ACATTGAAAG CGCCTGTGCT GCCCAACAAC 
GACCCTGCGG CCATCAGTCA TGAACAGGCA CATGCAGGTA TCACCGTCCA CATTCCCGGT 
TCCGTCAAGA TGTGCTGGGG AGATGGCATT CATTTCTACT GGGGTAAAAA CGTATCGACC 
ACAACGCTTT TCCATCGAGT AGGCGAGAAT AGCGTGGTGC GCGAGCTGTG TGTTTCCTAC 
CTGTTCACGC CCCACATTCA GTACGGCCTG ATCGACCTGT ATTACGAGCT CTACCGCGAT 
TGTCGACTGA TCGGCACATC ACCGGTGCTG CGTGTGAACG TCAATTACTC GGTACCTGTG 
ACCTCCAGGC AGCGCAGCCG CAAACGCCTG ATCAATCGCA GGTTTCCAGA CAAATAA
 
Protein sequence
MDKNKSTDVA ARTQLEKNGP ENASIVQEAP LHESLYRQAI AVHIPSDISD TLKAPVLPNN 
DPAAISHEQA HAGITVHIPG SVKMCWGDGI HFYWGKNVST TTLFHRVGEN SVVRELCVSY 
LFTPHIQYGL IDLYYELYRD CRLIGTSPVL RVNVNYSVPV TSRQRSRKRL INRRFPDK