Gene PSPTO_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1992 
Symbol 
ID1183637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2176562 
End bp2177041 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content57% 
IMG OID637393370 
Producthypothetical protein 
Protein accessionNP_791815 
Protein GI28869196 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.331155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG TCATGTCCAT GACGCTCCCG CTGATCAACA GCATCACGAT CCGTACGGCG 
ACATCGCAAG TCACCTACAG CCAGACAGCA GACAGCAACG TCGAAGCGTC TGCCAGCAGC
GCCAAAAGTG TGGAGGTCAA TCTGTCTTCG GAAGGCAAGG CGGCCGCATC GTCATCCTCA
AGAGATGCGG ATATCGAGCA GAGTGGCCTG CCTGCCTCTG TGCAGAAGAT TCTCAAGGGG
ATTCGCGAGC TGCAACGCAA GATCGAGGAA ACCATGGATC AGTTGCAAAA GGTTCTCAAC
GACCAGAGTC TGGACCCTGA AGAGCGCCGG ACCAAGGCTG CTGCGCTGCA GACCGTGCTC
AGCACGTTGC AGGCGCAGAT GAGCAACGCT ACAGCGGATC TCTCGTCGCT CATGAACAGC
CTGAAATCCA GCGACTCCGA CAAGATCAAC GCCGGCATGC TGGTTCTGGC GAAGATGTAA
 
Protein sequence
MHLVMSMTLP LINSITIRTA TSQVTYSQTA DSNVEASASS AKSVEVNLSS EGKAAASSSS 
RDADIEQSGL PASVQKILKG IRELQRKIEE TMDQLQKVLN DQSLDPEERR TKAAALQTVL
STLQAQMSNA TADLSSLMNS LKSSDSDKIN AGMLVLAKM