Gene PSPTO_1990 details

Gene Information

• Locus tag: PSPTO_1990
• Symbol: apt
• ID: 1183635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 2175076
• End bp: 2175624
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637393368
• Product: adenine phosphoribosyltransferase
• Protein accession: NP_791813
• Protein GI: 28869194
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.160211
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTCG ATCAATCGAA CTTCAAATCC CTGATACGCC CGGTCGTAGA CTTCCCCAAG 
CCGGGTGTGG TTTTTCGCGA CATCACGCCC CTGTTCCAGT CGCCCAAAGC CACCCGTCAG 
GTAATCGACA GTTTCGTGCA GCGCTATATC GATGCCGATT TCAGCCACAT CGGCGTCATG 
GATGCACGGG GTTTTCTGAT TGGTTCAGTG GTCGCGTATC AGTTGAACAA GCCGCTGGTG 
CTGTTTCGCA AGCAGGGCAA ACTGCCAGCT GACGTGCTGT CCGAGGCCTA TCAGACCGAA 
TACGGCGAAG CGTATCTGGA AGTGCACGCA GACAGTCTGT GCGAGGGTAA TTCAGTCATC 
ATGTTCGATG ACCTGATTGC TACCGGCGGC ACGCTGATCG CCGCCGCCAA CCTGATCCGC 
CGTATGGGCG CCCAGGTGCA CGAAGCCGCT GCAATCATCG ACTTGCCGGA ACTGGGTGGC 
TCCAAGCGTC TTAACGACCT GAACATCCCG ACGTTTTGCC TGACGGAATT TGCGTTGGAC 
GAGCAGTAA 

 

Protein sequence

MTFDQSNFKS LIRPVVDFPK PGVVFRDITP LFQSPKATRQ VIDSFVQRYI DADFSHIGVM 
DARGFLIGSV VAYQLNKPLV LFRKQGKLPA DVLSEAYQTE YGEAYLEVHA DSLCEGNSVI 
MFDDLIATGG TLIAAANLIR RMGAQVHEAA AIIDLPELGG SKRLNDLNIP TFCLTEFALD 
EQ